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1061 Commits

Author SHA1 Message Date
mike cullerton
19e0caa700 API endpoint for creating a DMN table from a spreadsheet 2021-08-11 08:55:10 -04:00
mike cullerton
dce95189cb Merge branch 'dev' into dmn-from-spreadsheet-395 2021-08-10 09:39:42 -04:00
mike cullerton
c153c5e344 Another test spreadsheet 2021-08-09 13:27:58 -04:00
mike cullerton
deebc49a82 Removed test files - don't need under version control 2021-08-03 12:20:25 -04:00
mike cullerton
0e20480f52 Removed test files - don't need under version control 2021-08-03 12:17:54 -04:00
mike cullerton
64576ee8fd It now adds the dmn file to the DB. 
Added annotations.

Still need to move it out of a script.
Maybe a new API endpoint and a new method in file_service
 2021-08-03 11:55:50 -04:00
Kelly McDonald
6e1fedb704 Add tests for libraries, remove an API endpoint that didn't make sense after recent changes and remove some commented out sections that were not needed after some decisions about the api endpoints were made 2021-08-03 10:02:22 -04:00
mike cullerton
deb16740f6 First attempt at creating dmn from spreadsheet. 
xml template and example spreadsheet
 2021-08-02 10:04:25 -04:00
mike cullerton
e1aee0f635 First attempt at creating dmn table from spreadsheet. 
Starting as a script
 2021-08-02 10:03:10 -04:00
Kelly McDonald
41ad7935f8 Merge branch 'dev' into 367-Call-Activity 
# Conflicts:
#	Pipfile.lock
 2021-07-29 09:28:21 -04:00
Kelly McDonald
217e61eed3 next_task returns the next available task, except when the task is completed when it returns the EndEvent - 
The problem was that it was returning the first EndEvent it found, not the last one. This caused a problem when we had a CallActivity which has its own EndEvent.

Fixes #399
 2021-07-27 09:19:08 -04:00
Kelly McDonald
b857fddbad commit in intermediate changes to work on a bug 2021-07-26 13:00:11 -04:00
Dan Funk
25e00823a7
Merge pull request #342 from sartography/enum-file-data-375 
Enum file data #375
 2021-07-23 13:47:57 -04:00
mike cullerton
4c8a86f9bf Fixed bug where processing file data only worked for enums. 2021-07-23 11:24:17 -04:00
Dan
7f5c7417d8 Print out some additional debugging information in the email script so we can tell what is happening and where. 2021-07-22 16:02:08 -04:00
Dan Funk
61504664d4
Merge pull request #346 from sartography/bug/346_timer_fails_to_send_email 
fixes #346, allow emails to fire in scheduled events
 2021-07-22 13:40:12 -04:00
Dan
2009a794ea We were depending on an active http request existing in order to fire emails, using that request to determine the front end url. We have the frontend url in our config file, and we don't have a request object when running scheduled tasks, so I just use our configuration setting instead. 2021-07-22 13:25:06 -04:00
mike cullerton
8df1145471 Modify the LDAP service to only use lowercase UIDs. 
UVA always returns the UID as lowercase.
This caused a postgres unique value problem for us.
 2021-07-22 10:46:09 -04:00
mike cullerton
428802b9d0 Modify LDAP script so that it doesn't raise an error when we don't get a record back from LDAP. 
We now return an empty dictionary
 2021-07-22 10:44:41 -04:00
Kelly McDonald
48516e4009 Parent side working 2021-07-22 10:23:05 -04:00
Kelly McDonald
2455495457 got library side working - still need to have parent working 2021-07-22 10:20:34 -04:00
mike cullerton
354e20c34b Use the data_store_service to set the data_store, rather than access DB directly. 
Pass the label explicitly (as the value)
 2021-07-15 13:09:40 -04:00
Dan
dd67a5e650 Never set the date to datetime.utcnow() on DateTime fields. We want this to fall back on the func.now() method and allow the database to set the time on insert. 2021-07-12 15:58:32 -04:00
Mike Cullerton
522ca9d164
Merge pull request #340 from sartography/bug/better_errors_on_scheduled_tasks 
Assure we log reasonably clear errors when executing scheduled tasks …
 2021-07-12 10:13:02 -04:00
Mike Cullerton
d1bf370a39
Merge pull request #339 from sartography/restrict-loaded-studies-374 
Restrict loaded studies #374
 2021-07-12 10:11:34 -04:00
Mike Cullerton
7070761089
Merge pull request #338 from sartography/document-spreadsheet-name-380 
Document spreadsheet name #380
 2021-07-12 10:11:16 -04:00
Dan
f982745d32 fixing a failing test, don't assume the study and workflow ids will always be 1. 2021-07-12 10:00:39 -04:00
Dan
1916c4ff54 Assure we log reasonably clear errors when executing scheduled tasks in the background, so that sentry can pick them up and they can be addressed effectively. 2021-07-12 09:43:12 -04:00
mike cullerton
690c059335 get_studies_for_user is no longer a static method 2021-07-09 10:37:57 -04:00
mike cullerton
dad2de9f0c get_user_studies now checks study_details['REVIEW_TYPE'] before displaying a study. 
This corresponds to REVIEWTYPENAME being `Full Committee`, `Expedited`, `Non-UVA IRB Full Board`, or `Non-UVA IRB Expedited`
 2021-07-09 10:37:25 -04:00
Kelly McDonald
79c69037dd Filter out Library categories from the list returned 2021-07-08 08:57:40 -04:00
mike cullerton
d6f9b013f7 Change irb_documents to documents 2021-07-07 12:54:03 -04:00
mike cullerton
23180908c8 Undo change. Wrong branch 2021-07-07 12:43:51 -04:00
mike cullerton
c39e08972d Change irb_documents to documents 2021-07-07 12:42:01 -04:00
Dan Funk
3c52453c26
Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:35:24 -04:00
Dan Funk
2ed436327f
Merge pull request #333 from sartography/check-study-script-273 
Check study script #273
 2021-07-07 11:28:32 -04:00
Dan Funk
db9b228735
Merge pull request #334 from sartography/WaitingEventsHotPatch 
Make a change so that anything that has a waiting event is labeled in…
 2021-07-07 11:27:10 -04:00
Dan
2a45f2fcda Merge branch 'dev' into add-name-error-hint-8 2021-07-07 11:24:00 -04:00
mike cullerton
b0cf74fa3d Merge branch 'dev' into add-by-user-61 
# Conflicts:
#	tests/files/test_files_api.py
 2021-07-07 10:46:50 -04:00
mike cullerton
c11b5cfb29 Add user_uid to api output 2021-07-07 08:18:02 -04:00
Dan
fb54edac1c Adding additional details to error messages, and cleaning up the cruft around these messages to keep them clear and succinct. 
Most noteable is the addition of the line on which the error occurs for script tasks.  It will report the line number and pass back the content of
the line that failed.
The validator only returns the first error it encounters, as it's clear that all we ever get right now is two of the same error.
Did a lot of work between this and spiffworkflow to remove all the places where we obfuscate or drop details as we converted between workflowExceptions and APIExceptions.
Dropped the python levenshtein dependency, in favor of just rolling a simple one ourselves in Spiffworkflow.
 2021-07-07 00:53:49 -04:00
mike cullerton
894377a607 Add user_uid to FileDataModel calls 2021-07-06 17:09:00 -04:00
mike cullerton
23be257db0 Add user_uid column to file_data table 2021-07-06 17:07:47 -04:00
Dan
a9805ad40c Adding some documentation for clarity. 2021-07-06 14:40:20 -04:00
Dan
cafdc4d100 Removing an unneeded modification to the database structure for lookup tables. 2021-07-06 14:02:07 -04:00
Dan
04842aa66b Undo change to 1 minute. 2021-07-06 13:13:07 -04:00
Dan
7aa4b0833c Merge remote-tracking branch 'origin/dev' into feature/documents_xls_refactor 2021-07-06 13:11:08 -04:00
Dan
1b1a994360 Refactoring Reference files to use the lookup table, rather than parsing the results directly out of the spreadsheet, or attempting to cache them. 
Adding a DocumentService to clean up the FileService, and get Documents well seperated, as it seems likely be pulled out or seperated in the future, there is now a Documents api file as well, for the same reason.
Some other minor changes are just fixing white space to assure our code is linting correctly.
I removed _create_study_workflow_approvals from the base test, as we don't use approvals like this anymore.
 2021-07-06 13:10:20 -04:00
Kelly McDonald
9803a04d6d Make a change so that anything that has a waiting event is labeled in the database as waiting, even if it is sitting around waiting on a user input task that is ready 2021-07-06 11:46:47 -04:00
Kelly McDonald
dce1d86e93 commit changes before looking at something else 2021-07-06 10:34:57 -04:00