Kelly McDonald
f592a8a0b0
Added a few more tests - I think I need to test one more script endpoint
2021-02-25 09:07:46 -05:00
Kelly McDonald
9bd3aa8dcb
service and scripts with working test - still needs a few more tests to try out, but should work to get Mike going
2021-02-24 12:55:23 -05:00
Kelly McDonald
c795dd7aea
Merge branch 'dev' into 206-extend-study-access
2021-02-24 12:16:35 -05:00
Kelly McDonald
3dbe39c6fe
initial checkin of changes for branch
2021-02-24 12:05:06 -05:00
mike cullerton
f937ac3ce9
Getting some thoughts down for the extension property error. This might force us to use regexes for the error service.
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Committing so I can work on another branch.
2021-02-24 10:56:25 -05:00
mike cullerton
0a58dce394
Changes for ticket 215 - Change email header and footer to say CR Connect
2021-02-23 12:13:21 -05:00
Dan Funk
349c3d657a
Merge branch 'dev' into 201-changes-to-in-progress
2021-02-22 18:17:59 -05:00
Dan Funk
53fa49e668
Merge pull request #243 from sartography/183-remove-study-approval-code
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Remove Approvals per ticket 183
2021-02-22 18:12:02 -05:00
mike cullerton
4fc2929356
Put the preamble back in to the error message.
2021-02-19 15:57:01 -05:00
mike cullerton
3b06795c4c
File cleanup for readability. Removed some commented code.
2021-02-19 14:49:53 -05:00
Kelly McDonald
4fa0f9720a
Allow frontend to honor 'view as' and fix problem with tests
2021-02-18 11:25:17 -05:00
Kelly McDonald
8c309e9a41
Add user display name to the response for task events
2021-02-18 08:44:44 -05:00
Kelly McDonald
6fbaecf9b2
Change selection to include task events that are for someone else, but are on a study I own.
2021-02-18 08:09:13 -05:00
Dan Funk
f0a921d46d
Merge pull request #242 from sartography/allow-period-in-field-id-199
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Allow period in field id 199
2021-02-17 15:08:53 -05:00
Kelly McDonald
93f29e86d8
Merge branch 'dev' into STG-181_frontend-ux-model-changes
2021-02-17 07:49:05 -05:00
Dan
ff8a44a7b1
Make sure we always have a current user, even if the very first task is a script task.
2021-02-16 12:42:59 -05:00
Kelly McDonald
e54a6956df
Make a change in the case that we have no task_events at all.
2021-02-16 11:10:40 -05:00
Kelly McDonald
118cf62172
Merge remote-tracking branch 'origin/dev' into STG-181_frontend-ux-model-changes
2021-02-16 10:07:34 -05:00
Kelly McDonald
003bf2f9b9
Remove Approvals per ticket 183
2021-02-16 09:05:29 -05:00
Kelly McDonald
3b1dc70558
Add comment for later ticket
2021-02-16 08:44:41 -05:00
mike cullerton
ed6218028c
We now allow periods in field ids.
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Also, added task_id and task_name to the ApiError for missing default value on hidden and required fields
2021-02-15 16:27:56 -05:00
mike cullerton
39eb5c5c21
This is a decent beginning framework for customer error messages.
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It is not complete, but is in a state where we can start to interact with the front end.
Two tests are failing.
Committing so I can work on an error for Alex.
2021-02-12 14:18:42 -05:00
Dan
c44e784eb2
Fixing a bug with the user model.
2021-02-12 09:48:41 -05:00
Dan Funk
35773ebc29
Merge pull request #240 from sartography/weird-email-error
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The email script was failing validation because of missing parameters…
2021-02-12 09:31:52 -05:00
Nile Walker
7eeb491dfa
User str decode Removed
2021-02-12 09:30:18 -05:00
mike cullerton
d8bd203139
The email script was failing validation because of missing parameters in scripts.email.do_task_validate_only.
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I added a test in tests.test_email_script to make sure we get the default email_address.
I also found and fixed a bug in workflow_service.populate_form_with_random_data where we would overwrite default_values with random text because of a missing continue.
(We don't want to continue if we have repeating fields though.)
2021-02-11 15:36:12 -05:00
Dan Funk
fe4e737596
Merge pull request #238 from sartography/value-expression-failing-shield-test-194
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We now allow value_expression to evaluate to an empty string ("") so …
2021-02-11 11:25:09 -05:00
Dan Funk
df0cfc755b
Merge pull request #237 from sartography/get-study-from-model-error-191
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We now test whether we have a valid StudyModel when getting a study b…
2021-02-11 11:23:59 -05:00
Dan Funk
40639bbd03
Merge pull request #236 from sartography/trap-non-api-errors-187
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New error handler for non Api errors. Ticket 187
2021-02-11 11:22:48 -05:00
Dan Funk
df25b83958
Merge pull request #235 from sartography/index-error-for-enums-186
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Index error for enums 186
2021-02-11 11:21:50 -05:00
Dan Funk
10b9c7b892
Merge pull request #234 from sartography/hidden-and-required-fields-185
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Hidden and required fields 185
2021-02-11 11:20:35 -05:00
Dan
f7337f4e54
Merge branch 'dev' of github.com:sartography/cr-connect-workflow into dev
2021-02-11 11:17:56 -05:00
Dan
2ada9f6f42
Private Ldap settings
2021-02-11 11:17:21 -05:00
mike cullerton
39e874504f
We now allow value_expression to evaluate to an empty string ("") so that we *do not* set a default value for enums in some cases.
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This was causing an error because "" was not an option for the enum.
2021-02-10 14:35:58 -05:00
mike cullerton
8a2a8b1443
Still not in working order. Committing to work on another ticket.
2021-02-10 12:28:59 -05:00
Kelly McDonald
da0af14724
Changes to enable front-end changes
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Added a human readable name to created user
added last updated task time and name,
added is_review on the workflow which is triggered by a swimlane with a name present.
Notably - it does NOT update or change any of the performance concerns that we were having with this.
2021-02-10 11:58:19 -05:00
mike cullerton
777cfbdecd
We now test whether we have a valid StudyModel when getting a study by study model.
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We raise an ApiError if the model is None or empty.
2021-02-09 17:37:55 -05:00
mike cullerton
3e32cdedc4
New error handler for non Api errors. Ticket 187
2021-02-09 16:35:57 -05:00
mike cullerton
b42b843f7d
It was possible for an enum field lookup to return an empty list. This meant there were no options for the list.
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We now test for this and raise an error.
2021-02-08 15:10:53 -05:00
mike cullerton
e87e7b5b8b
Form fields that can be hidden and required must now have a default value or value_expression.
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Also, if a field is hidden but not required, it should not produce a value.
2021-02-08 10:18:41 -05:00
mike cullerton
fa34bee18a
First commit for cleaning up error messages for customers.
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This is *not* in a working state.
Committing this so I can work on another ticket.
2021-02-04 11:23:05 -05:00
Dan Funk
329146237e
Merge pull request #232 from sartography/boolean-default-values-175
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Boolean default values 175
2021-02-03 16:34:54 -05:00
Dan Funk
effd11f947
Merge pull request #231 from sartography/cancellations-137
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Cancellations 137
2021-02-03 16:31:18 -05:00
Dan Funk
2d01b92a50
Merge pull request #230 from sartography/pretty-emails-160
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Pretty emails 160
2021-02-03 16:20:38 -05:00
Dan Funk
1eba20f420
Merge pull request #229 from sartography/workflow-spec-order-74
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Workflow spec order 74
2021-02-03 16:18:34 -05:00
mike cullerton
b090e31e00
This fixes 2 issues with setting boolean defaults
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- If the default was False, we failed an early test and returned None. We now only return None if default is None
- We have a better test for deciding if the default value we return should be True or False. We used to return True if the value was the string 'false'.
2021-02-03 09:50:16 -05:00
mike cullerton
c5cf3ea7ff
Changed call to WorkflowProcessor.reset to reflect change from class method to instance method.
2021-01-29 14:34:09 -05:00
mike cullerton
7e76639cf3
When a study is put on hold, we now reset workflows and call any pending cancel_notify events.
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In api.study.update_study we test the study status and call the new WorkflowService method process_workflows_for_cancels.
In services.workflow_service we added the new method process_workflows_for_cancels. It loops through workflows for a study, and resets them if they are in progress.
In services.workflow_processor, we changed the reset method to be an instance method so we can call self.cancel_notify.
In tests.test_lookup_service we changed the call to WorkflowProcessor.reset to reflect the change from class method to instance method
2021-01-29 14:05:07 -05:00
mike cullerton
958d5a6281
Possible solution for W3C issues raised by Sonarcloud
2021-01-28 09:45:53 -05:00
mike cullerton
d7a3afe8f4
changed the template to use the responsive html email template at https://github.com/leemunroe/responsive-html-email-template
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added method get_cr_connect_wrapper to render our new html email template. This takes the email text generated from the task element documentation as the email_body.
2021-01-27 17:12:03 -05:00
Dan Funk
cccb722e07
Merge pull request #226 from sartography/enum_default_value_expression_162
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Enum default value expression 162
2021-01-27 10:43:46 -05:00
mike cullerton
81e55b6055
Cleaning up my smell. A task should only have default_value *or* value_expresion, not both.
2021-01-27 10:21:13 -05:00
mike cullerton
c99a388405
We now set the display_order automatically. Users can modify order using the arrows.
2021-01-27 09:50:29 -05:00
Dan Funk
98f946c119
Merge pull request #227 from sartography/missing_form_key_163
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Missing form key 163
2021-01-27 09:42:46 -05:00
mike cullerton
ecc553c4ea
Jinja templates and svg file for pretty emails
2021-01-26 09:20:16 -05:00
mike cullerton
909af9b8d6
Change HTML emails so they look like the CR-Connect website. Add logo, color, style, etc.
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Cleaned up email script a little.
Also, email script no longer uses services.mails. It uses email_service directly now.
2021-01-26 09:19:28 -05:00
mike cullerton
b71fd93dd4
We now make sure that forms have a form key. Ticket 163
2021-01-22 12:14:17 -05:00
mike cullerton
00d9276483
In spiff_task_to_api_task, when looping through fields, if the field doesn't have a value, we now try to set it with the default value
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In test_spec, we now check for FIELD_PROP_VALUE_EXPRESSION when setting default values
2021-01-22 10:00:28 -05:00
Dan
5921ce9f10
Merge branch 'dev' into 152-workflow-spec-pull
2021-01-21 12:30:43 -05:00
Dan Funk
5b13195182
Merge pull request #224 from sartography/restart-with-no-data-99
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Restart with no data 99
2021-01-20 17:22:18 -05:00
Dan
41dac33039
Removed two tests around soft_reset that are no longer required.
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Reset should construct the workflow_processor, thus completing the reset process.
Removed the spec argument from init, as it is never used anywhere.
2021-01-20 13:24:53 -05:00
mike cullerton
039a1dcd79
WorkflowProcessor code for new restart_workflow api endpoint. WorkflowProcessor.reset will clear workflow_model.bpmn_workflow_json, and if clear_data is True will clear form data.
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WorkflowProcessor.__init__ is mostly unchanged.
2021-01-19 15:14:36 -05:00
mike cullerton
9c71a503ca
Python code for new restart_workflow api endpoint. Cleaned up code and docstring in get_workflow to match.
2021-01-19 15:09:20 -05:00
mike cullerton
e1532a90c9
New api endpoint for restarting a workflow. Unsure if I needed the responses section. **Dan, can you check this?**
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Also, removed clear_data and reload_spec as parameters for standard get workflow endpoint.
2021-01-19 15:00:39 -05:00
mike cullerton
6a9e6d3570
Restart workflow without form data. Committing so Dan can check it out
2021-01-14 15:32:14 -05:00
Kelly McDonald
cf7990ce85
Refactor for better readability due to code smell test
2021-01-12 08:54:32 -05:00
Kelly McDonald
e14b896225
Add documentation
2021-01-11 09:31:08 -05:00
Kelly McDonald
f282a9ef73
Make sure that top_level_workflow is transferred over, also include reference files in the list of files to sync
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We may want to revisit this because I used a 'Magic' workflow_ref_id of 'REFERENCE_FILES' as a special case so I could re-use most of what I already had. This works well, but we may want to structure it different.
2021-01-11 09:21:44 -05:00
Dan
336c093bf8
Catch errors when building enumeration lists.
2021-01-08 15:15:24 -05:00
Dan
26655b26d3
merging in dev, and fixing a failing test from dev.
2021-01-08 14:42:13 -05:00
Dan Funk
9118517995
Merge pull request #220 from sartography/prevent-duplicate-template-upload-111
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Users cannot upload a workflow_spec_file that already exists. We rais…
2021-01-08 13:55:19 -05:00
Dan Funk
be288ae048
Merge pull request #219 from sartography/fix-api-call-missing-fieldname-143
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Fixed ApiError call. Now includes task_id and task_name.
2021-01-08 13:46:26 -05:00
Dan Funk
81fe3e7957
Merge pull request #218 from sartography/is-file-uploaded-143
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Ticket 143. Test whether file is uploaded.
2021-01-08 13:45:24 -05:00
Dan
72a73c1fc4
Allow for synch to work even if the local set of workflow specifications are completely empty.
2021-01-08 13:23:01 -05:00
mike cullerton
d274813ae5
We now check form field IDs so they play well with Python and Javascript.
2021-01-07 11:10:31 -05:00
mike cullerton
c9a4a9685f
Users cannot upload a workflow_spec_file that already exists. We raise an error that is displayed on the fron end.
2021-01-04 15:47:45 -05:00
mike cullerton
0ae4448fbe
Fixed ApiError call. Now includes task_id and task_name.
2021-01-04 13:48:34 -05:00
Dan
b0dc834682
Don't error out on autocomplete_num
2021-01-04 13:41:57 -05:00
mike cullerton
0c47d09972
Ticket 143. Test whether file is uploaded.
2021-01-04 10:53:21 -05:00
Dan Funk
386feddeed
Merge pull request #214 from sartography/validate-hide-expression-103
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Modified study_info do_task_validate_only so that we take the default…
2020-12-31 10:53:27 -05:00
Dan Funk
cf106fb9cd
Merge pull request #216 from sartography/place-study-on-hold-20
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Studies can now be put on hold in the dashboard. We were overriding t…
2020-12-31 10:53:03 -05:00
mike cullerton
ede5df4df5
Studies can now be put on hold in the dashboard. We were overriding the status in StudyModel.update_from_protocol_builder.
2020-12-30 17:49:59 -05:00
Dan
efdbbcbc72
StudyInfo sometimes returns arrays of items, each item in the array should be coverted to a Box dictionary if possible.
2020-12-30 14:51:51 -05:00
mike cullerton
f29429f0d0
Modified study_info do_task_validate_only so that we take the default path in ind_update workflow.
2020-12-30 10:04:10 -05:00
Dan
e5a38874f6
A hard or soft reset should also cause a 'cancel_notify' which will kick off any CANCEL events. If this happens during
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a hard or soft reset, and an error is thrown trying to fulfil a cancel event, the reset should still fire.
Sending emails still had a number of issues correctly parsing it's arguments. This is corrected.
2020-12-29 18:05:13 -05:00
Dan
c288a8a2bc
Merge branch 'dev' into check-field-type#143
2020-12-29 11:11:43 -05:00
mike cullerton
7938ac8eed
We now assure each form field has a field type. Modified populate_form_with_random_data, added check at beginning of form field loop.
2020-12-28 18:02:16 -05:00
Dan
6cfce839c1
Validation now assures that we won't encounter errors when generating navigation lists.
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Fixing workflow sync paths that were incorrect.
Repairing a suddenly failing test in files, that just don't make no sense.
Bumping spiffworkflow that contains a fix for issue #155
2020-12-28 17:33:38 -05:00
Dan
1f9bf72c59
Merge branch 'dev' into bug/navigation
2020-12-14 11:46:44 -05:00
Dan Funk
4268d0f482
Merge pull request #208 from sartography/152-workflow-spec-pull
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152 workflow spec pull
2020-12-14 11:35:06 -05:00
Dan
bcb78de225
Merge branch 'dev' into bug/navigation
2020-12-14 11:33:51 -05:00
Dan Funk
e54404e424
Merge pull request #205 from sartography/test-email-script
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Test email script
2020-12-14 11:28:14 -05:00
Dan
6bf24cc438
fixing some failing tests related to changes in the underlying spiffworkflow library.
2020-12-14 11:27:38 -05:00
Dan
b62a9c7074
Merge remote-tracking branch 'origin/dev' into bug/navigation
2020-12-14 10:40:21 -05:00
Dan
fd4b881416
upgrading the pip libraries.
2020-12-14 10:30:10 -05:00
Kelly McDonald
ee3ee9fd4a
Added tests to cover most of the use cases and code, and a bunch of stuff to make the mocks happy
2020-12-14 10:27:40 -05:00
Dan
02ea414b94
Additional fixes to Navigation to allow a nested navigation structure.
2020-12-14 10:07:19 -05:00
mike cullerton
7defc2b02f
Tests for uid in logs. Currently we test for uid in a response. This covers ApiError.
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Currently, we don't have a test for Sentry. Unsure how to do this.
Also added a script, service and test workflow to help. (Also to learn about adding a script and service.)
2020-12-11 17:47:53 -05:00
mike cullerton
856fe445b0
Added user.uid to ApiError and Sentry logging
2020-12-11 16:26:03 -05:00
Kelly McDonald
adc4dc4453
redid the api a bit so that nothing was using open security - added a new endpoint for getting a workflow spec that uses the alternate API_TOKEN security and leave the original endpoint as it was.
2020-12-11 12:03:41 -05:00