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1065 Commits

Author SHA1 Message Date
Dan
cc915ac25a refactoring the study service. 2022-02-09 08:50:00 -05:00
mike cullerton
0a4f63f048 category back to category_id 2022-02-08 16:39:31 -05:00
mike cullerton
5396226b0f Fix reorder spec tests 2022-02-08 16:35:36 -05:00
mike cullerton
ccfb4b4cda self was BaseTest in base_test and the test class in the actual test, so we couldn't find workflow_spec_service 2022-02-08 16:35:15 -05:00
Dan
25ecc1593a test_workflow_spec_api passing. 2022-02-08 13:35:27 -05:00
alicia pritchett
112226e9b0 libraries on a spec are now just strings in a list 2022-02-08 11:38:43 -05:00
Dan
6c0e38c0a5 Merge branch 'feature/spec_files_wthout_db' of github.com:sartography/cr-connect-workflow into feature/spec_files_wthout_db 2022-02-08 11:31:56 -05:00
Dan
dc040f190e got one more test to work. 2022-02-08 11:30:13 -05:00
mike cullerton
3f856355e2 Merge branch 'git-integration-596' into feature/spec_files_wthout_db 
# Conflicts:
#	config/testing.py
#	crc/services/lookup_service.py
 2022-02-08 10:38:03 -05:00
mike cullerton
dfb05764db *** WIP *** 
Committing to merge in the git integration code
 2022-02-08 10:27:48 -05:00
alicia pritchett
a4fb00b0ed remove bad imports 2022-02-07 15:28:52 -05:00
Dan
f40fb26a8f a few more tests passing 2022-02-07 15:17:32 -05:00
Dan
4b8d193fb9 a few more tests passing 2022-02-07 14:58:25 -05:00
mike cullerton
5c3ab9a035 Move copy_files_to_file_system to base_test 2022-02-07 13:43:20 -05:00
Dan
d64853fa5b two passing tests around the WorkflowSpecService 2022-02-07 13:34:13 -05:00
Dan
056f901f9a WIP - its just caos right now. 2022-02-07 12:59:48 -05:00
Dan
ad095aaaf5 don't try to load the workflowspecservice too early. 2022-02-07 12:38:00 -05:00
Dan
abc17a8aff load the workflow_spec_service from app to avoid frequent file scans. 2022-02-07 12:30:20 -05:00
Dan
1c384a78e9 the tests kind of try and run now ... 2022-02-07 12:18:32 -05:00
Dan
ff9b2694ae Fix migrations that depend on removed models. 2022-02-07 11:56:22 -05:00
Dan
ed07907ee2 at least allow the tests to spin up, even if they all fail. 2022-02-07 11:00:19 -05:00
Dan
2383c7d76d WIP - lots of random changes, trying to swtich over 2022-02-04 14:50:31 -05:00
mike cullerton
9a98b10073 Three tests; get_repo, _get_repo, and push_to_remote 2022-02-04 14:04:52 -05:00
Dan
6765afbd02 WIP - Move the categories and specifications out of the database. 2022-02-04 13:51:39 -05:00
Dan
4ec6e403f5 1. Created a UserFileService, so it's clear what we use when for File Services, UserFiles, SpecFiles, and ReferenceFiles each function differently. 
2. Reference Files and Spec Files are written to disk, they do not exist in the database at all.
 2022-02-02 12:59:56 -05:00
mike cullerton
070c3cfd5d *** WIP *** 
New API endpoints, and associated methods.
Services for the new endpoints
Minimal test
 2022-02-01 10:49:35 -05:00
mike cullerton
c9b7d95a83 *** WIP *** 
Beginning of Git integration
- added gitpython to Pipfile
- started additions for api, model, service, and a test
 2022-01-28 16:11:36 -05:00
Dan
4c00a5762f partial commit - new spec_file_service, and new spec_file_api endpoints that use spec and file name, not file id. 
removed worklow_sync
cleaned up file and workflow models
most of the test are broken.
 2022-01-28 06:42:37 -05:00
Dan Funk
97c29bf77c
Merge pull request #449 from sartography/files-to-filesystem-572 
Files to filesystem 572
 2022-01-26 10:11:26 -05:00
mike cullerton
d82367ab2a Move temp_migration_service code into migration 7225d990740e 
Delete test_files_to_filesystem and test_files_from_filesystem--they were only used to give me access to the migration methods
 2022-01-26 09:58:46 -05:00
Dan
8529465322 Removed the method get_spec_data_files completly - using get_spec_files and get_spec_data to get this information instead. 
Only load the spec data files if you are creating a new workflow, otherwise just deserialize the json.
Removed the stuff about calculaing the version of the spec, as we don't use it.
 2022-01-25 16:10:54 -05:00
mike cullerton
4e7f05e9dc Added description to the test. 2022-01-25 12:22:32 -05:00
mike cullerton
467d99f698 Test for processing erroring workflows. 
This only tests that we have good information in the message, not whether the message was sent.
 2022-01-25 12:19:32 -05:00
Dan Funk
58b3378fbf
Merge pull request #448 from sartography/get-spec-from-workflow-id-589 
Get spec from workflow id #589
 2022-01-24 16:40:53 -05:00
mike cullerton
209ea49962 Test for new script 2022-01-24 12:41:08 -05:00
mike cullerton
6f31a26772 Better description 2022-01-24 11:06:01 -05:00
mike cullerton
2ecf6cdf86 Validation is the right way to test this. 2022-01-24 11:03:49 -05:00
mike cullerton
73e250a54c Test for missing library hint in the error message 2022-01-24 10:35:11 -05:00
mike cullerton
91fa44b2ab ** WIP ** 
Committing so I can work on another ticket.
 2022-01-21 14:37:11 -05:00
mike cullerton
68820c67cb Removed (almost) all references to WorkflowSpecDependencyFile 
(There is still a call in the lookup service, but we need to decide how to fix that)
 2022-01-19 16:12:54 -05:00
mike cullerton
16a9a18c5b Fixed get reference file info, and added test 2022-01-19 15:17:35 -05:00
mike cullerton
091d71eb0f Cleaned up code around differences between file info and file data 
Cleaned up some api code around differences between file, spec_file, and reference_file
Cleaned up some api code around differences between file info and file data
Fixed some tests for file api
 2022-01-19 13:47:14 -05:00
mike cullerton
68ac056457 Merge branch 'dev' into files-to-filesystem-572 2022-01-18 08:18:14 -05:00
mike cullerton
6da6e05171 *** WIP *** 
code for updating spec files
some cleanup

tests pass, but we don't have all the tests we need.
 2022-01-13 15:24:29 -05:00
mike cullerton
7e5f2a7d6a We no longer use versioning for spec files 2022-01-12 15:09:03 -05:00
mike cullerton
ca58b0d2d2 added TODO comments 2022-01-12 15:08:34 -05:00
mike cullerton
88a8c96bd6 The reference document is already created in load_example_data 
This lead to a failing test after cleaning up the way we add/update files
 2022-01-12 15:07:57 -05:00
mike cullerton
b99ed73951 Remove unused imports 2022-01-12 15:00:26 -05:00
mike cullerton
cfa9f00bf3 *** WIP *** 
Moved reference files to their own service
 2022-01-12 14:37:33 -05:00
mike cullerton
b0cf11c8c0 We won't do workflow sync this way anymore. 
We need to add code for the new way.
These tests fail, so commenting for now, in case some of it is useful.
 2022-01-12 13:17:52 -05:00