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cr-connect-workflow
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Make sure that top_level_workflow is transferred over, also include reference files in the list of files to sync 

We may want to revisit this because I used a 'Magic' workflow_ref_id of 'REFERENCE_FILES' as a special case so I could re-use most of what I already had. This works well, but we may want to structure it different.
This commit is contained in:
Kelly McDonald 2021-01-11 09:21:44 -05:00
parent d8ac20b1c3
commit f282a9ef73
2 changed files with 67 additions and 32 deletions
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45
crc/api/workflow_sync.py
View File

@ -91,13 +91,30 @@ def sync_all_changed_workflows(remote):
workflows = workflowsdf.reset_index().to_dict(orient='records')
for workflow in workflows:
sync_changed_files(remote,workflow['workflow_spec_id'])
sync_changed_files(remote,'REFERENCE_FILES')
return [x['workflow_spec_id'] for x in workflows]
def file_get(workflow_spec_id,filename):
if workflow_spec_id == 'REFERENCE_FILES':
currentfile = session.query(FileModel).filter(FileModel.is_reference == True,
FileModel.name == filename).first()
else:
currentfile = session.query(FileModel).filter(FileModel.workflow_spec_id==workflow_spec_id,
FileModel.name == filename).first()
return currentfile
def sync_changed_files(remote,workflow_spec_id):
# make sure that spec is local before syncing files
if workflow_spec_id != 'REFERENCE_FILES':
specdict = WorkflowSyncService.get_remote_workflow_spec(remote,workflow_spec_id)
# if we are updating from a master spec, then we want to make sure it is the only
# master spec in our local system.
if specdict['is_master_spec']:
masterspecs = session.query(WorkflowSpecModel).filter(WorkflowSpecModel.is_master_spec == True).all()
for masterspec in masterspecs:
masterspec.is_master_spec = False
session.add(masterspec)
localspec = session.query(WorkflowSpecModel).filter(WorkflowSpecModel.id == workflow_spec_id).first()
if localspec is None:
@ -120,9 +137,12 @@ def sync_changed_files(remote,workflow_spec_id):
localspec.display_order = specdict['display_order']
localspec.display_name = specdict['display_name']
localspec.name = specdict['name']
localspec.is_master_spec = specdict['is_master_spec']
localspec.description = specdict['description']
session.add(localspec)
changedfiles = get_changed_files(remote,workflow_spec_id,as_df=True)
if len(changedfiles)==0:
return []
@ -133,8 +153,7 @@ def sync_changed_files(remote,workflow_spec_id):
deletefiles = deletefiles.reset_index().to_dict(orient='records')
for delfile in deletefiles:
currentfile = session.query(FileModel).filter(FileModel.workflow_spec_id==workflow_spec_id,
FileModel.name == delfile['filename']).first()
currentfile = file_get(workflow_spec_id,delfile['filename'])
# it is more appropriate to archive the file than delete
# due to the fact that we might have workflows that are using the
@ -143,11 +162,14 @@ def sync_changed_files(remote,workflow_spec_id):
session.add(currentfile)
for updatefile in updatefiles:
currentfile = session.query(FileModel).filter(FileModel.workflow_spec_id==workflow_spec_id,
FileModel.name == updatefile['filename']).first()
currentfile = file_get(workflow_spec_id,updatefile['filename'])
if not currentfile:
currentfile = FileModel()
currentfile.name = updatefile['filename']
if workflow_spec_id == 'REFERENCE_FILES':
currentfile.workflow_spec_id = None
currentfile.is_reference = True
else:
currentfile.workflow_spec_id = workflow_spec_id
currentfile.date_created = updatefile['date_created']
@ -174,6 +196,13 @@ def get_changed_files(remote,workflow_spec_id,as_df=False):
local = get_workflow_spec_files_dataframe(workflow_spec_id).reset_index()
local['md5_hash'] = local['md5_hash'].astype('str')
remote_files['md5_hash'] = remote_files['md5_hash'].astype('str')
if len(local) == 0:
remote_files['new'] = True
remote_files['location'] = 'remote'
if as_df:
return remote_files
else:
return remote_files.reset_index().to_dict(orient='records')
different = remote_files.merge(local,
right_on=['filename','md5_hash'],
@ -249,6 +278,9 @@ def get_workflow_spec_files_dataframe(workflowid):
hash so we can determine file differences for a changed workflow on a box.
Return a dataframe
"""
if workflowid == 'REFERENCE_FILES':
x = session.query(FileDataModel).join(FileModel).filter(FileModel.is_reference == True)
else:
x = session.query(FileDataModel).join(FileModel).filter(FileModel.workflow_spec_id == workflowid)
# there might be a cleaner way of getting a data frome from some of the
# fields in the ORM - but this works OK
@ -295,6 +327,9 @@ def get_all_spec_state_dataframe():
'md5_hash':file.md5_hash,
'filename':file.file_model.name,
'date_created':file.date_created})
if len(filelist) == 0:
df = pd.DataFrame(columns=['file_model_id','workflow_spec_id','md5_hash','filename','date_created'])
else:
df = pd.DataFrame(filelist)
# get a distinct list of file_model_id's with the most recent file_data retained

4
crc/services/workflow_sync.py
View File

@ -26,7 +26,7 @@ class WorkflowSyncService(object):
this just gets the details of a workflow spec from the
remote side.
"""
url = remote+'/v1.0/workflow-sync/'+workflow_spec_id+'/spec'
url = remote+'/v1.0/workflow_sync/'+workflow_spec_id+'/spec'
return WorkflowSyncService.__make_request(url)
@staticmethod
@ -39,7 +39,7 @@ class WorkflowSyncService(object):
try:
response = requests.get(url,headers={'X-CR-API-KEY':app.config['API_TOKEN']})
except:
raise ApiError("workflow_sync_error",response.text)
raise ApiError("workflow_sync_error",url)
if response.ok and response.text:
if return_contents:
return response.content