Adding tests
This commit is contained in:
parent
a561a5cddc
commit
cef7c48be2
|
@ -11,7 +11,7 @@ from crc.models.protocol_builder import ProtocolBuilderStatus, \
|
||||||
ProtocolBuilderStudySchema
|
ProtocolBuilderStudySchema
|
||||||
from crc.models.approval import ApprovalStatus
|
from crc.models.approval import ApprovalStatus
|
||||||
from crc.models.task_event import TaskEventModel
|
from crc.models.task_event import TaskEventModel
|
||||||
from crc.models.study import StudyModel, StudySchema, StudyStatus
|
from crc.models.study import StudyEvent, StudyModel, StudySchema, StudyStatus
|
||||||
from crc.models.workflow import WorkflowSpecModel, WorkflowModel
|
from crc.models.workflow import WorkflowSpecModel, WorkflowModel
|
||||||
from crc.services.file_service import FileService
|
from crc.services.file_service import FileService
|
||||||
from crc.services.workflow_processor import WorkflowProcessor
|
from crc.services.workflow_processor import WorkflowProcessor
|
||||||
|
@ -134,10 +134,12 @@ class TestStudyApi(BaseTest):
|
||||||
|
|
||||||
def test_update_study(self):
|
def test_update_study(self):
|
||||||
self.load_example_data()
|
self.load_example_data()
|
||||||
|
update_comment = 'Updating the study'
|
||||||
study: StudyModel = session.query(StudyModel).first()
|
study: StudyModel = session.query(StudyModel).first()
|
||||||
study.title = "Pilot Study of Fjord Placement for Single Fraction Outcomes to Cortisol Susceptibility"
|
study.title = "Pilot Study of Fjord Placement for Single Fraction Outcomes to Cortisol Susceptibility"
|
||||||
study_schema = StudySchema().dump(study)
|
study_schema = StudySchema().dump(study)
|
||||||
study_schema['status'] = StudyStatus.in_progress.value
|
study_schema['status'] = StudyStatus.in_progress.value
|
||||||
|
study_schema['comment'] = update_comment
|
||||||
rv = self.app.put('/v1.0/study/%i' % study.id,
|
rv = self.app.put('/v1.0/study/%i' % study.id,
|
||||||
content_type="application/json",
|
content_type="application/json",
|
||||||
headers=self.logged_in_headers(),
|
headers=self.logged_in_headers(),
|
||||||
|
@ -147,6 +149,12 @@ class TestStudyApi(BaseTest):
|
||||||
self.assertEqual(study.title, json_data['title'])
|
self.assertEqual(study.title, json_data['title'])
|
||||||
self.assertEqual(study.status.value, json_data['status'])
|
self.assertEqual(study.status.value, json_data['status'])
|
||||||
|
|
||||||
|
# Making sure events history is being properly recorded
|
||||||
|
study_events = session.query(StudyEvent)
|
||||||
|
self.assertEqual(study_events.count(), 1)
|
||||||
|
self.assertEqual(study_events.first().status, StudyStatus.in_progress)
|
||||||
|
self.assertEqual(study_events.first().comment, update_comment)
|
||||||
|
|
||||||
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_investigators') # mock_studies
|
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_investigators') # mock_studies
|
||||||
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_required_docs') # mock_docs
|
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_required_docs') # mock_docs
|
||||||
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_study_details') # mock_details
|
@patch('crc.services.protocol_builder.ProtocolBuilderService.get_study_details') # mock_details
|
||||||
|
|
|
@ -19,7 +19,7 @@ class TestStudyDetailsDocumentsScript(BaseTest):
|
||||||
|
|
||||||
"""
|
"""
|
||||||
1. get a list of all documents related to the study.
|
1. get a list of all documents related to the study.
|
||||||
2. For this study, is this document required accroding to the protocol builder?
|
2. For this study, is this document required accroding to the protocol builder?
|
||||||
3. For ALL uploaded documents, what the total number of files that were uploaded? per instance of this document naming
|
3. For ALL uploaded documents, what the total number of files that were uploaded? per instance of this document naming
|
||||||
convention that we are implementing for the IRB.
|
convention that we are implementing for the IRB.
|
||||||
"""
|
"""
|
||||||
|
|
|
@ -84,7 +84,7 @@ class TestStudyService(BaseTest):
|
||||||
# Assure the workflow is now started, and knows the total and completed tasks.
|
# Assure the workflow is now started, and knows the total and completed tasks.
|
||||||
studies = StudyService.get_studies_for_user(user)
|
studies = StudyService.get_studies_for_user(user)
|
||||||
workflow = next(iter(studies[0].categories[0].workflows)) # Workflows is a set.
|
workflow = next(iter(studies[0].categories[0].workflows)) # Workflows is a set.
|
||||||
# self.assertEqual(WorkflowStatus.user_input_required, workflow.status)
|
# self.assertEqual(WorkflowStatus.user_input_required, workflow.status)
|
||||||
self.assertTrue(workflow.total_tasks > 0)
|
self.assertTrue(workflow.total_tasks > 0)
|
||||||
self.assertEqual(0, workflow.completed_tasks)
|
self.assertEqual(0, workflow.completed_tasks)
|
||||||
self.assertIsNotNone(workflow.spec_version)
|
self.assertIsNotNone(workflow.spec_version)
|
||||||
|
|
Loading…
Reference in New Issue