From 491a7de879845ba8e92a3d6e7582edc001e95747 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Fri, 19 Mar 2021 19:54:34 +0000
Subject: [PATCH 01/11] Bump urllib3 from 1.26.2 to 1.26.3 in /deploy

Bumps [urllib3](https://github.com/urllib3/urllib3) from 1.26.2 to 1.26.3.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](https://github.com/urllib3/urllib3/compare/1.26.2...1.26.3)

Signed-off-by: dependabot[bot] <support@github.com>
---
 deploy/requirements.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/deploy/requirements.txt b/deploy/requirements.txt
index b9ab7b4c..8fd3649b 100644
--- a/deploy/requirements.txt
+++ b/deploy/requirements.txt
@@ -80,7 +80,7 @@ sphinxcontrib-serializinghtml==1.1.4
 spiffworkflow
 sqlalchemy==1.3.20
 swagger-ui-bundle==0.0.8
-urllib3==1.26.2
+urllib3==1.26.3
 waitress==1.4.4
 webob==1.8.6
 webtest==2.0.35

From f1ca44a0e19901d01604c0a265a7cc5aa3009952 Mon Sep 17 00:00:00 2001
From: Kelly McDonald <kelly@fammcdonald.net>
Date: Tue, 23 Mar 2021 10:17:48 -0400
Subject: [PATCH 02/11] Add primitive cache on the fileservice is_review,
 halves the time of loading the list on the primary dashboard

---
 crc/services/cache_service.py | 47 +++++++++++++++++++++++++++++++++++
 crc/services/file_service.py  |  3 ++-
 crc/services/study_service.py |  1 +
 3 files changed, 50 insertions(+), 1 deletion(-)
 create mode 100644 crc/services/cache_service.py

diff --git a/crc/services/cache_service.py b/crc/services/cache_service.py
new file mode 100644
index 00000000..366b750c
--- /dev/null
+++ b/crc/services/cache_service.py
@@ -0,0 +1,47 @@
+import time
+
+cache_store = {}
+
+import time
+
+def timeit(f):
+
+    def timed(*args, **kw):
+
+        ts = time.time()
+        result = f(*args, **kw)
+        te = time.time()
+        print('func:%r args:[%r, %r] took: %2.4f sec' % (f.__name__, args, kw, te-ts))
+        return result
+
+    return timed
+
+# first pass - meant to be down and dirty
+def purge_cache(now):
+    dellist = []
+    for key in cache_store.keys():
+        if cache_store[key]['timeout'] < now:
+            dellist.append(key)
+    for key in dellist:
+        del cache_store[key]
+
+def cache(f,timeout=60):
+    """Cache the values for function for x minutes
+       we still have work to do to make a optional kw argument
+       to set the length of time to cache
+    """
+    def cached(*args, **kw):
+        now = time.time()
+        purge_cache(now)
+        key =f.__name__+str(args)+str(kw)
+        if key in cache_store.keys():
+            return cache_store[key]['value']
+        else:
+            newtime = now+timeout*60
+        result = f(*args, **kw)
+        cache_store[key] ={}
+        cache_store[key]['value'] = result
+        cache_store[key]['timeout'] = newtime
+        return result
+
+    return cached
\ No newline at end of file
diff --git a/crc/services/file_service.py b/crc/services/file_service.py
index cd4f69f1..805a8e81 100644
--- a/crc/services/file_service.py
+++ b/crc/services/file_service.py
@@ -16,7 +16,7 @@ from crc import session, app
 from crc.api.common import ApiError
 from crc.models.file import FileType, FileDataModel, FileModel, LookupFileModel, LookupDataModel
 from crc.models.workflow import WorkflowSpecModel, WorkflowModel, WorkflowSpecDependencyFile
-
+from crc.services.cache_service import cache
 
 class FileService(object):
     """Provides consistent management and rules for storing, retrieving and processing files."""
@@ -58,6 +58,7 @@ class FileService(object):
         return code in doc_dict
 
     @staticmethod
+    @cache
     def is_workflow_review(workflow_spec_id):
         files = session.query(FileModel).filter(FileModel.workflow_spec_id==workflow_spec_id).all()
         review = any([f.is_review for f in files])
diff --git a/crc/services/study_service.py b/crc/services/study_service.py
index c4576578..895703c7 100644
--- a/crc/services/study_service.py
+++ b/crc/services/study_service.py
@@ -23,6 +23,7 @@ from crc.services.ldap_service import LdapService
 from crc.services.protocol_builder import ProtocolBuilderService
 from crc.services.workflow_processor import WorkflowProcessor
 from SpiffWorkflow import Task as SpiffTask
+from crc.services.cache_service import timeit
 
 class StudyService(object):
     """Provides common tools for working with a Study"""

From 02995da69923def1e212d6fd71f5336a304c884a Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Fri, 26 Mar 2021 21:47:31 +0000
Subject: [PATCH 03/11] Bump lxml from 4.6.2 to 4.6.3

Bumps [lxml](https://github.com/lxml/lxml) from 4.6.2 to 4.6.3.
- [Release notes](https://github.com/lxml/lxml/releases)
- [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt)
- [Commits](https://github.com/lxml/lxml/compare/lxml-4.6.2...lxml-4.6.3)

Signed-off-by: dependabot[bot] <support@github.com>
---
 Pipfile.lock | 425 +++++++++++++++++++++------------------------------
 1 file changed, 175 insertions(+), 250 deletions(-)

diff --git a/Pipfile.lock b/Pipfile.lock
index 2788ee2e..d0246927 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -25,32 +25,24 @@
         },
         "alembic": {
             "hashes": [
+                "sha256:422883bf429105b9b5f1fece6d79da64ed1ee648af2ef256d9b52edac236bc46",
                 "sha256:e871118b6174681f7e9a9ea67cfcae954c6d18e05b49c6b17f662d2530c76bf5"
             ],
             "index": "pypi",
             "version": "==1.5.4"
         },
-        "amqp": {
-            "hashes": [
-                "sha256:1e759a7f202d910939de6eca45c23a107f6b71111f41d1282c648e9ac3d21901",
-                "sha256:affdd263d8b8eb3c98170b78bf83867cdb6a14901d586e00ddb65bfe2f0c4e60"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.5"
-        },
         "aniso8601": {
             "hashes": [
-                "sha256:be08b19c19ca527af722f2d4ba4dc569db292ec96f7de963746df4bb0bff9250",
-                "sha256:f59914762c5049ffd956cad037aa82fe0cabf8baf51900e2af24026761090b0b"
+                "sha256:1d2b7ef82963909e93c4f24ce48d4de9e66009a21bf1c1e1c85bdd0812fe412f",
+                "sha256:72e3117667eedf66951bb2d93f4296a56b94b078a8a95905a052611fb3f1b973"
             ],
-            "version": "==8.1.1"
+            "version": "==9.0.1"
         },
         "attrs": {
             "hashes": [
                 "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
                 "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.3.0"
         },
         "babel": {
@@ -58,7 +50,6 @@
                 "sha256:9d35c22fcc79893c3ecc85ac4a56cde1ecf3f19c540bba0922308a6c06ca6fa5",
                 "sha256:da031ab54472314f210b0adcff1588ee5d1d1d0ba4dbd07b94dba82bde791e05"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.9.0"
         },
         "bcrypt": {
@@ -71,7 +62,6 @@
                 "sha256:cd1ea2ff3038509ea95f687256c46b79f5fc382ad0aa3664d200047546d511d1",
                 "sha256:cdcdcb3972027f83fe24a48b1e90ea4b584d35f1cc279d76de6fc4b13376239d"
             ],
-            "markers": "python_version >= '3.6'",
             "version": "==3.2.0"
         },
         "beautifulsoup4": {
@@ -82,27 +72,12 @@
             ],
             "version": "==4.9.3"
         },
-        "billiard": {
-            "hashes": [
-                "sha256:bff575450859a6e0fbc2f9877d9b715b0bbc07c3565bb7ed2280526a0cdf5ede",
-                "sha256:d91725ce6425f33a97dfa72fb6bfef0e47d4652acd98a032bd1a7fbf06d5fa6a"
-            ],
-            "version": "==3.6.3.0"
-        },
         "blinker": {
             "hashes": [
                 "sha256:471aee25f3992bd325afa3772f1063dbdbbca947a041b8b89466dc00d606f8b6"
             ],
             "version": "==1.4"
         },
-        "celery": {
-            "hashes": [
-                "sha256:5e8d364e058554e83bbb116e8377d90c79be254785f357cb2cec026e79febe13",
-                "sha256:f4efebe6f8629b0da2b8e529424de376494f5b7a743c321c8a2ddc2b1414921c"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.5"
-        },
         "certifi": {
             "hashes": [
                 "sha256:1a4995114262bffbc2413b159f2a1a480c969de6e6eb13ee966d470af86af59c",
@@ -157,7 +132,6 @@
                 "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa",
                 "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==4.0.0"
         },
         "click": {
@@ -165,29 +139,8 @@
                 "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a",
                 "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==7.1.2"
         },
-        "click-didyoumean": {
-            "hashes": [
-                "sha256:112229485c9704ff51362fe34b2d4f0b12fc71cc20f6d2b3afabed4b8bfa6aeb"
-            ],
-            "version": "==0.0.3"
-        },
-        "click-plugins": {
-            "hashes": [
-                "sha256:46ab999744a9d831159c3411bb0c79346d94a444df9a3a3742e9ed63645f264b",
-                "sha256:5d262006d3222f5057fd81e1623d4443e41dcda5dc815c06b442aa3c02889fc8"
-            ],
-            "version": "==1.1.1"
-        },
-        "click-repl": {
-            "hashes": [
-                "sha256:9c4c3d022789cae912aad8a3f5e1d7c2cdd016ee1225b5212ad3e8691563cda5",
-                "sha256:b9f29d52abc4d6059f8e276132a111ab8d94980afe6a5432b9d996544afa95d5"
-            ],
-            "version": "==0.1.6"
-        },
         "clickclick": {
             "hashes": [
                 "sha256:4efb13e62353e34c5eef7ed6582c4920b418d7dedc86d819e22ee089ba01802c",
@@ -202,14 +155,6 @@
             ],
             "version": "==0.9.1"
         },
-        "configparser": {
-            "hashes": [
-                "sha256:005c3b102c96f4be9b8f40dafbd4997db003d07d1caa19f37808be8031475f2a",
-                "sha256:08e8a59ef1817ac4ed810bb8e17d049566dd6e024e7566f6285c756db2bb4ff8"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.1"
-        },
         "connexion": {
             "extras": [
                 "swagger-ui"
@@ -278,18 +223,16 @@
         },
         "deprecated": {
             "hashes": [
-                "sha256:471ec32b2755172046e28102cd46c481f21c6036a0ec027521eba8521aa4ef35",
-                "sha256:924b6921f822b64ec54f49be6700a126bab0640cfafca78f22c9d429ed590560"
+                "sha256:08452d69b6b5bc66e8330adde0a4f8642e969b9e1702904d137eeb29c8ffc771",
+                "sha256:6d2de2de7931a968874481ef30208fd4e08da39177d61d3d4ebdf4366e7dbca1"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==1.2.11"
+            "version": "==1.2.12"
         },
         "docutils": {
             "hashes": [
                 "sha256:0c5b78adfbf7762415433f5515cd5c9e762339e23369dbe8000d84a4bf4ab3af",
                 "sha256:c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==0.16"
         },
         "docxtpl": {
@@ -369,18 +312,59 @@
         },
         "flask-sqlalchemy": {
             "hashes": [
-                "sha256:05b31d2034dd3f2a685cbbae4cfc4ed906b2a733cff7964ada450fd5e462b84e",
-                "sha256:bfc7150eaf809b1c283879302f04c42791136060c6eeb12c0c6674fb1291fae5"
+                "sha256:2bda44b43e7cacb15d4e05ff3cc1f8bc97936cc464623424102bfc2c35e95912",
+                "sha256:f12c3d4cc5cc7fdcc148b9527ea05671718c3ea45d50c7e732cceb33f574b390"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==2.4.4"
+            "version": "==2.5.1"
         },
-        "future": {
+        "greenlet": {
             "hashes": [
-                "sha256:b1bead90b70cf6ec3f0710ae53a525360fa360d306a86583adc6bf83a4db537d"
+                "sha256:0a77691f0080c9da8dfc81e23f4e3cffa5accf0f5b56478951016d7cfead9196",
+                "sha256:0ddd77586553e3daf439aa88b6642c5f252f7ef79a39271c25b1d4bf1b7cbb85",
+                "sha256:111cfd92d78f2af0bc7317452bd93a477128af6327332ebf3c2be7df99566683",
+                "sha256:122c63ba795fdba4fc19c744df6277d9cfd913ed53d1a286f12189a0265316dd",
+                "sha256:181300f826625b7fd1182205b830642926f52bd8cdb08b34574c9d5b2b1813f7",
+                "sha256:1a1ada42a1fd2607d232ae11a7b3195735edaa49ea787a6d9e6a53afaf6f3476",
+                "sha256:1bb80c71de788b36cefb0c3bb6bfab306ba75073dbde2829c858dc3ad70f867c",
+                "sha256:1d1d4473ecb1c1d31ce8fd8d91e4da1b1f64d425c1dc965edc4ed2a63cfa67b2",
+                "sha256:292e801fcb3a0b3a12d8c603c7cf340659ea27fd73c98683e75800d9fd8f704c",
+                "sha256:2c65320774a8cd5fdb6e117c13afa91c4707548282464a18cf80243cf976b3e6",
+                "sha256:4365eccd68e72564c776418c53ce3c5af402bc526fe0653722bc89efd85bf12d",
+                "sha256:5352c15c1d91d22902582e891f27728d8dac3bd5e0ee565b6a9f575355e6d92f",
+                "sha256:58ca0f078d1c135ecf1879d50711f925ee238fe773dfe44e206d7d126f5bc664",
+                "sha256:5d4030b04061fdf4cbc446008e238e44936d77a04b2b32f804688ad64197953c",
+                "sha256:5d69bbd9547d3bc49f8a545db7a0bd69f407badd2ff0f6e1a163680b5841d2b0",
+                "sha256:5f297cb343114b33a13755032ecf7109b07b9a0020e841d1c3cedff6602cc139",
+                "sha256:62afad6e5fd70f34d773ffcbb7c22657e1d46d7fd7c95a43361de979f0a45aef",
+                "sha256:647ba1df86d025f5a34043451d7c4a9f05f240bee06277a524daad11f997d1e7",
+                "sha256:719e169c79255816cdcf6dccd9ed2d089a72a9f6c42273aae12d55e8d35bdcf8",
+                "sha256:7cd5a237f241f2764324396e06298b5dee0df580cf06ef4ada0ff9bff851286c",
+                "sha256:875d4c60a6299f55df1c3bb870ebe6dcb7db28c165ab9ea6cdc5d5af36bb33ce",
+                "sha256:90b6a25841488cf2cb1c8623a53e6879573010a669455046df5f029d93db51b7",
+                "sha256:94620ed996a7632723a424bccb84b07e7b861ab7bb06a5aeb041c111dd723d36",
+                "sha256:b5f1b333015d53d4b381745f5de842f19fe59728b65f0fbb662dafbe2018c3a5",
+                "sha256:c5b22b31c947ad8b6964d4ed66776bcae986f73669ba50620162ba7c832a6b6a",
+                "sha256:c93d1a71c3fe222308939b2e516c07f35a849c5047f0197442a4d6fbcb4128ee",
+                "sha256:cdb90267650c1edb54459cdb51dab865f6c6594c3a47ebd441bc493360c7af70",
+                "sha256:cfd06e0f0cc8db2a854137bd79154b61ecd940dce96fad0cba23fe31de0b793c",
+                "sha256:d3789c1c394944084b5e57c192889985a9f23bd985f6d15728c745d380318128",
+                "sha256:da7d09ad0f24270b20f77d56934e196e982af0d0a2446120cb772be4e060e1a2",
+                "sha256:df3e83323268594fa9755480a442cabfe8d82b21aba815a71acf1bb6c1776218",
+                "sha256:df8053867c831b2643b2c489fe1d62049a98566b1646b194cc815f13e27b90df",
+                "sha256:e1128e022d8dce375362e063754e129750323b67454cac5600008aad9f54139e",
+                "sha256:e6e9fdaf6c90d02b95e6b0709aeb1aba5affbbb9ccaea5502f8638e4323206be",
+                "sha256:eac8803c9ad1817ce3d8d15d1bb82c2da3feda6bee1153eec5c58fa6e5d3f770",
+                "sha256:eb333b90036358a0e2c57373f72e7648d7207b76ef0bd00a4f7daad1f79f5203",
+                "sha256:ed1d1351f05e795a527abc04a0d82e9aecd3bdf9f46662c36ff47b0b00ecaf06",
+                "sha256:f3dc68272990849132d6698f7dc6df2ab62a88b0d36e54702a8fd16c0490e44f",
+                "sha256:f59eded163d9752fd49978e0bab7a1ff21b1b8d25c05f0995d140cc08ac83379",
+                "sha256:f5e2d36c86c7b03c94b8459c3bd2c9fe2c7dab4b258b8885617d44a22e453fb7",
+                "sha256:f6f65bf54215e4ebf6b01e4bb94c49180a589573df643735107056f7a910275b",
+                "sha256:f8450d5ef759dbe59f84f2c9f77491bb3d3c44bc1a573746daf086e70b14c243",
+                "sha256:f97d83049715fd9dec7911860ecf0e17b48d8725de01e45de07d8ac0bd5bc378"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
-            "version": "==0.18.2"
+            "markers": "python_version >= '3'",
+            "version": "==1.0.0"
         },
         "gunicorn": {
             "hashes": [
@@ -402,7 +386,6 @@
                 "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
                 "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.10"
         },
         "imagesize": {
@@ -410,7 +393,6 @@
                 "sha256:6965f19a6a2039c7d48bca7dba2473069ff854c36ae6f19d2cde309d998228a1",
                 "sha256:b1f6b5a4eab1f73479a50fb79fcf729514a900c341d8503d62a62dbc4127a2b1"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.2.0"
         },
         "inflection": {
@@ -418,15 +400,20 @@
                 "sha256:1a29730d366e996aaacffb2f1f1cb9593dc38e2ddd30c91250c6dde09ea9b417",
                 "sha256:f38b2b640938a4f35ade69ac3d053042959b62a0f1076a5bbaa1b9526605a8a2"
             ],
-            "markers": "python_version >= '3.5'",
             "version": "==0.5.1"
         },
+        "isodate": {
+            "hashes": [
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             "version": "==1.1.0"
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@@ -441,7 +428,6 @@
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             "version": "==2.11.3"
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@@ -451,20 +437,9 @@
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@@ -472,52 +447,51 @@
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-            "version": "==4.6.2"
+            "version": "==4.6.3"
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         "mako": {
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             "version": "==1.1.4"
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@@ -583,7 +557,6 @@
                 "sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be",
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             "version": "==1.1.1"
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@@ -637,16 +610,23 @@
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-            "markers": "python_version >= '3.7'",
             "version": "==1.20.1"
         },
+        "openapi-schema-validator": {
+            "hashes": [
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+            ],
+            "version": "==0.1.5"
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-            "version": "==0.2.9"
+            "version": "==0.3.0"
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@@ -661,7 +641,6 @@
                 "sha256:5b327ac1320dc863dca72f4514ecc086f31186744b84a230374cc1fd776feae5",
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             "version": "==20.9"
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@@ -688,14 +667,6 @@
             "index": "pypi",
             "version": "==1.2.2"
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-        "prompt-toolkit": {
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-            "version": "==3.0.16"
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                 "sha256:0deac2af1a587ae12836aa07970f5cb91964f05a7c6cdb69d8425ff4c15d4e2c",
@@ -739,19 +710,8 @@
         },
         "pyasn1": {
             "hashes": [
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@@ -760,7 +720,6 @@
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             "version": "==2.20"
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@@ -773,11 +732,10 @@
         },
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-            "version": "==2.8.0"
+            "version": "==2.8.1"
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@@ -792,14 +750,12 @@
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@@ -828,9 +784,7 @@
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@@ -862,17 +816,24 @@
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                 "sha256:74c1485f7707cf707a7aef42ef6322b8f97921bd89be2ab6317fd782c2d53183",
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                 "sha256:8c1be557ee92a20f184922c7b6424e8ab6691788e6d86137c5d93c1a6ec1b8fb",
                 "sha256:bb4191dfc9306777bc594117aee052446b3fa88737cd13b7188d0e7aa8162185",
+                "sha256:bfb51918d4ff3d77c1c856a9699f8492c612cde32fd3bcd344af9be34999bfdc",
                 "sha256:c20cfa2d49991c8b4147af39859b167664f2ad4561704ee74c1de03318e898db",
+                "sha256:cb333c16912324fd5f769fff6bc5de372e9e7a202247b48870bc251ed40239aa",
                 "sha256:d2d9808ea7b4af864f35ea216be506ecec180628aced0704e34aca0b040ffe46",
+                "sha256:d483ad4e639292c90170eb6f7783ad19490e7a8defb3e46f97dfe4bacae89122",
                 "sha256:dd5de0646207f053eb0d6c74ae45ba98c3395a571a2891858e87df7c9b9bd51b",
                 "sha256:e1d4970ea66be07ae37a3c2e48b5ec63f7ba6804bdddfdbd3cfd954d25a82e63",
                 "sha256:e4fac90784481d221a8e4b1162afa7c47ed953be40d31ab4629ae917510051df",
-                "sha256:fa5ae20527d8e831e8230cbffd9f8fe952815b2b7dae6ffec25318803a7528fc"
+                "sha256:fa5ae20527d8e831e8230cbffd9f8fe952815b2b7dae6ffec25318803a7528fc",
+                "sha256:fd7f6999a8070df521b6384004ef42833b9bd62cfee11a09bda1079b4b704247",
+                "sha256:fdc842473cd33f45ff6bce46aea678a54e3d21f1b61a7750ce3c498eedfe25d6",
+                "sha256:fe69978f3f768926cfa37b867e3843918e012cf83f680806599ddce33c2c68b0"
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5'",
             "version": "==5.4.1"
         },
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@@ -907,7 +868,6 @@
                 "sha256:30639c035cdb23534cd4aa2dd52c3bf48f06e5f4a941509c8bafd8ce11080259",
                 "sha256:8b74bedcbbbaca38ff6d7491d76f2b06b3592611af620f8426e82dddb04a5ced"
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             "version": "==1.15.0"
         },
         "snowballstemmer": {
@@ -919,11 +879,11 @@
         },
         "soupsieve": {
             "hashes": [
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+                "sha256:052774848f448cf19c7e959adf5566904d525f33a3f8b6ba6f6f8f26ec7de0cc",
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             "markers": "python_version >= '3.0'",
-            "version": "==2.2"
+            "version": "==2.2.1"
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@@ -938,7 +898,6 @@
                 "sha256:806111e5e962be97c29ec4c1e7fe277bfd19e9652fb1a4392105b43e01af885a",
                 "sha256:a072735ec80e7675e3f432fcae8610ecf509c5f1869d17e2eecff44389cdbc58"
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@@ -946,7 +905,6 @@
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         "sphinxcontrib-htmlhelp": {
@@ -954,7 +912,6 @@
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@@ -962,7 +919,6 @@
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@@ -970,7 +926,6 @@
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@@ -978,7 +933,6 @@
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@@ -987,47 +941,42 @@
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-            "version": "==1.3.23"
+            "version": "==1.4.3"
         },
         "swagger-ui-bundle": {
             "hashes": [
@@ -1039,42 +988,24 @@
         },
         "urllib3": {
             "hashes": [
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-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.0"
+            "version": "==1.26.4"
         },
         "waitress": {
             "hashes": [
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-                "sha256:3d633e78149eb83b60a07dfabb35579c29aac2d24bb803c18b26fb2ab1a584db"
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-            "version": "==0.2.5"
+            "version": "==2.0.0"
         },
         "webob": {
             "hashes": [
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-                "sha256:aa3a917ed752ba3e0b242234b2a373f9c4e2a75d35291dcbe977649bd21fd108"
+                "sha256:73aae30359291c14fa3b956f8b5ca31960e420c28c1bec002547fb04928cf89b",
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-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
-            "version": "==1.8.6"
+            "version": "==1.8.7"
         },
         "webtest": {
             "hashes": [
@@ -1128,7 +1059,6 @@
                 "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
                 "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
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             "version": "==20.3.0"
         },
         "coverage": {
@@ -1198,7 +1128,6 @@
                 "sha256:5b327ac1320dc863dca72f4514ecc086f31186744b84a230374cc1fd776feae5",
                 "sha256:67714da7f7bc052e064859c05c595155bd1ee9f69f76557e21f051443c20947a"
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             "version": "==20.9"
         },
         "pbr": {
@@ -1214,7 +1143,6 @@
                 "sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0",
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             "version": "==0.13.1"
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         "py": {
@@ -1222,7 +1150,6 @@
                 "sha256:21b81bda15b66ef5e1a777a21c4dcd9c20ad3efd0b3f817e7a809035269e1bd3",
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             "version": "==1.10.0"
         },
         "pyparsing": {
@@ -1230,7 +1157,6 @@
                 "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1",
                 "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"
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             "version": "==2.4.7"
         },
         "pytest": {
@@ -1246,7 +1172,6 @@
                 "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b",
                 "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"
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-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
             "version": "==0.10.2"
         }
     }

From a28f1f3750ce05eb4cd4e32c5e077f37c3c54073 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Fri, 26 Mar 2021 23:56:10 +0000
Subject: [PATCH 04/11] Bump lxml from 4.6.2 to 4.6.3

Bumps [lxml](https://github.com/lxml/lxml) from 4.6.2 to 4.6.3.
- [Release notes](https://github.com/lxml/lxml/releases)
- [Changelog](https://github.com/lxml/lxml/blob/master/CHANGES.txt)
- [Commits](https://github.com/lxml/lxml/compare/lxml-4.6.2...lxml-4.6.3)

Signed-off-by: dependabot[bot] <support@github.com>
---
 Pipfile.lock | 425 +++++++++++++++++++++------------------------------
 1 file changed, 175 insertions(+), 250 deletions(-)

diff --git a/Pipfile.lock b/Pipfile.lock
index 2788ee2e..d0246927 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -25,32 +25,24 @@
         },
         "alembic": {
             "hashes": [
+                "sha256:422883bf429105b9b5f1fece6d79da64ed1ee648af2ef256d9b52edac236bc46",
                 "sha256:e871118b6174681f7e9a9ea67cfcae954c6d18e05b49c6b17f662d2530c76bf5"
             ],
             "index": "pypi",
             "version": "==1.5.4"
         },
-        "amqp": {
-            "hashes": [
-                "sha256:1e759a7f202d910939de6eca45c23a107f6b71111f41d1282c648e9ac3d21901",
-                "sha256:affdd263d8b8eb3c98170b78bf83867cdb6a14901d586e00ddb65bfe2f0c4e60"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.5"
-        },
         "aniso8601": {
             "hashes": [
-                "sha256:be08b19c19ca527af722f2d4ba4dc569db292ec96f7de963746df4bb0bff9250",
-                "sha256:f59914762c5049ffd956cad037aa82fe0cabf8baf51900e2af24026761090b0b"
+                "sha256:1d2b7ef82963909e93c4f24ce48d4de9e66009a21bf1c1e1c85bdd0812fe412f",
+                "sha256:72e3117667eedf66951bb2d93f4296a56b94b078a8a95905a052611fb3f1b973"
             ],
-            "version": "==8.1.1"
+            "version": "==9.0.1"
         },
         "attrs": {
             "hashes": [
                 "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
                 "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.3.0"
         },
         "babel": {
@@ -58,7 +50,6 @@
                 "sha256:9d35c22fcc79893c3ecc85ac4a56cde1ecf3f19c540bba0922308a6c06ca6fa5",
                 "sha256:da031ab54472314f210b0adcff1588ee5d1d1d0ba4dbd07b94dba82bde791e05"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.9.0"
         },
         "bcrypt": {
@@ -71,7 +62,6 @@
                 "sha256:cd1ea2ff3038509ea95f687256c46b79f5fc382ad0aa3664d200047546d511d1",
                 "sha256:cdcdcb3972027f83fe24a48b1e90ea4b584d35f1cc279d76de6fc4b13376239d"
             ],
-            "markers": "python_version >= '3.6'",
             "version": "==3.2.0"
         },
         "beautifulsoup4": {
@@ -82,27 +72,12 @@
             ],
             "version": "==4.9.3"
         },
-        "billiard": {
-            "hashes": [
-                "sha256:bff575450859a6e0fbc2f9877d9b715b0bbc07c3565bb7ed2280526a0cdf5ede",
-                "sha256:d91725ce6425f33a97dfa72fb6bfef0e47d4652acd98a032bd1a7fbf06d5fa6a"
-            ],
-            "version": "==3.6.3.0"
-        },
         "blinker": {
             "hashes": [
                 "sha256:471aee25f3992bd325afa3772f1063dbdbbca947a041b8b89466dc00d606f8b6"
             ],
             "version": "==1.4"
         },
-        "celery": {
-            "hashes": [
-                "sha256:5e8d364e058554e83bbb116e8377d90c79be254785f357cb2cec026e79febe13",
-                "sha256:f4efebe6f8629b0da2b8e529424de376494f5b7a743c321c8a2ddc2b1414921c"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.5"
-        },
         "certifi": {
             "hashes": [
                 "sha256:1a4995114262bffbc2413b159f2a1a480c969de6e6eb13ee966d470af86af59c",
@@ -157,7 +132,6 @@
                 "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa",
                 "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==4.0.0"
         },
         "click": {
@@ -165,29 +139,8 @@
                 "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a",
                 "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==7.1.2"
         },
-        "click-didyoumean": {
-            "hashes": [
-                "sha256:112229485c9704ff51362fe34b2d4f0b12fc71cc20f6d2b3afabed4b8bfa6aeb"
-            ],
-            "version": "==0.0.3"
-        },
-        "click-plugins": {
-            "hashes": [
-                "sha256:46ab999744a9d831159c3411bb0c79346d94a444df9a3a3742e9ed63645f264b",
-                "sha256:5d262006d3222f5057fd81e1623d4443e41dcda5dc815c06b442aa3c02889fc8"
-            ],
-            "version": "==1.1.1"
-        },
-        "click-repl": {
-            "hashes": [
-                "sha256:9c4c3d022789cae912aad8a3f5e1d7c2cdd016ee1225b5212ad3e8691563cda5",
-                "sha256:b9f29d52abc4d6059f8e276132a111ab8d94980afe6a5432b9d996544afa95d5"
-            ],
-            "version": "==0.1.6"
-        },
         "clickclick": {
             "hashes": [
                 "sha256:4efb13e62353e34c5eef7ed6582c4920b418d7dedc86d819e22ee089ba01802c",
@@ -202,14 +155,6 @@
             ],
             "version": "==0.9.1"
         },
-        "configparser": {
-            "hashes": [
-                "sha256:005c3b102c96f4be9b8f40dafbd4997db003d07d1caa19f37808be8031475f2a",
-                "sha256:08e8a59ef1817ac4ed810bb8e17d049566dd6e024e7566f6285c756db2bb4ff8"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.1"
-        },
         "connexion": {
             "extras": [
                 "swagger-ui"
@@ -278,18 +223,16 @@
         },
         "deprecated": {
             "hashes": [
-                "sha256:471ec32b2755172046e28102cd46c481f21c6036a0ec027521eba8521aa4ef35",
-                "sha256:924b6921f822b64ec54f49be6700a126bab0640cfafca78f22c9d429ed590560"
+                "sha256:08452d69b6b5bc66e8330adde0a4f8642e969b9e1702904d137eeb29c8ffc771",
+                "sha256:6d2de2de7931a968874481ef30208fd4e08da39177d61d3d4ebdf4366e7dbca1"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==1.2.11"
+            "version": "==1.2.12"
         },
         "docutils": {
             "hashes": [
                 "sha256:0c5b78adfbf7762415433f5515cd5c9e762339e23369dbe8000d84a4bf4ab3af",
                 "sha256:c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==0.16"
         },
         "docxtpl": {
@@ -369,18 +312,59 @@
         },
         "flask-sqlalchemy": {
             "hashes": [
-                "sha256:05b31d2034dd3f2a685cbbae4cfc4ed906b2a733cff7964ada450fd5e462b84e",
-                "sha256:bfc7150eaf809b1c283879302f04c42791136060c6eeb12c0c6674fb1291fae5"
+                "sha256:2bda44b43e7cacb15d4e05ff3cc1f8bc97936cc464623424102bfc2c35e95912",
+                "sha256:f12c3d4cc5cc7fdcc148b9527ea05671718c3ea45d50c7e732cceb33f574b390"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==2.4.4"
+            "version": "==2.5.1"
         },
-        "future": {
+        "greenlet": {
             "hashes": [
-                "sha256:b1bead90b70cf6ec3f0710ae53a525360fa360d306a86583adc6bf83a4db537d"
+                "sha256:0a77691f0080c9da8dfc81e23f4e3cffa5accf0f5b56478951016d7cfead9196",
+                "sha256:0ddd77586553e3daf439aa88b6642c5f252f7ef79a39271c25b1d4bf1b7cbb85",
+                "sha256:111cfd92d78f2af0bc7317452bd93a477128af6327332ebf3c2be7df99566683",
+                "sha256:122c63ba795fdba4fc19c744df6277d9cfd913ed53d1a286f12189a0265316dd",
+                "sha256:181300f826625b7fd1182205b830642926f52bd8cdb08b34574c9d5b2b1813f7",
+                "sha256:1a1ada42a1fd2607d232ae11a7b3195735edaa49ea787a6d9e6a53afaf6f3476",
+                "sha256:1bb80c71de788b36cefb0c3bb6bfab306ba75073dbde2829c858dc3ad70f867c",
+                "sha256:1d1d4473ecb1c1d31ce8fd8d91e4da1b1f64d425c1dc965edc4ed2a63cfa67b2",
+                "sha256:292e801fcb3a0b3a12d8c603c7cf340659ea27fd73c98683e75800d9fd8f704c",
+                "sha256:2c65320774a8cd5fdb6e117c13afa91c4707548282464a18cf80243cf976b3e6",
+                "sha256:4365eccd68e72564c776418c53ce3c5af402bc526fe0653722bc89efd85bf12d",
+                "sha256:5352c15c1d91d22902582e891f27728d8dac3bd5e0ee565b6a9f575355e6d92f",
+                "sha256:58ca0f078d1c135ecf1879d50711f925ee238fe773dfe44e206d7d126f5bc664",
+                "sha256:5d4030b04061fdf4cbc446008e238e44936d77a04b2b32f804688ad64197953c",
+                "sha256:5d69bbd9547d3bc49f8a545db7a0bd69f407badd2ff0f6e1a163680b5841d2b0",
+                "sha256:5f297cb343114b33a13755032ecf7109b07b9a0020e841d1c3cedff6602cc139",
+                "sha256:62afad6e5fd70f34d773ffcbb7c22657e1d46d7fd7c95a43361de979f0a45aef",
+                "sha256:647ba1df86d025f5a34043451d7c4a9f05f240bee06277a524daad11f997d1e7",
+                "sha256:719e169c79255816cdcf6dccd9ed2d089a72a9f6c42273aae12d55e8d35bdcf8",
+                "sha256:7cd5a237f241f2764324396e06298b5dee0df580cf06ef4ada0ff9bff851286c",
+                "sha256:875d4c60a6299f55df1c3bb870ebe6dcb7db28c165ab9ea6cdc5d5af36bb33ce",
+                "sha256:90b6a25841488cf2cb1c8623a53e6879573010a669455046df5f029d93db51b7",
+                "sha256:94620ed996a7632723a424bccb84b07e7b861ab7bb06a5aeb041c111dd723d36",
+                "sha256:b5f1b333015d53d4b381745f5de842f19fe59728b65f0fbb662dafbe2018c3a5",
+                "sha256:c5b22b31c947ad8b6964d4ed66776bcae986f73669ba50620162ba7c832a6b6a",
+                "sha256:c93d1a71c3fe222308939b2e516c07f35a849c5047f0197442a4d6fbcb4128ee",
+                "sha256:cdb90267650c1edb54459cdb51dab865f6c6594c3a47ebd441bc493360c7af70",
+                "sha256:cfd06e0f0cc8db2a854137bd79154b61ecd940dce96fad0cba23fe31de0b793c",
+                "sha256:d3789c1c394944084b5e57c192889985a9f23bd985f6d15728c745d380318128",
+                "sha256:da7d09ad0f24270b20f77d56934e196e982af0d0a2446120cb772be4e060e1a2",
+                "sha256:df3e83323268594fa9755480a442cabfe8d82b21aba815a71acf1bb6c1776218",
+                "sha256:df8053867c831b2643b2c489fe1d62049a98566b1646b194cc815f13e27b90df",
+                "sha256:e1128e022d8dce375362e063754e129750323b67454cac5600008aad9f54139e",
+                "sha256:e6e9fdaf6c90d02b95e6b0709aeb1aba5affbbb9ccaea5502f8638e4323206be",
+                "sha256:eac8803c9ad1817ce3d8d15d1bb82c2da3feda6bee1153eec5c58fa6e5d3f770",
+                "sha256:eb333b90036358a0e2c57373f72e7648d7207b76ef0bd00a4f7daad1f79f5203",
+                "sha256:ed1d1351f05e795a527abc04a0d82e9aecd3bdf9f46662c36ff47b0b00ecaf06",
+                "sha256:f3dc68272990849132d6698f7dc6df2ab62a88b0d36e54702a8fd16c0490e44f",
+                "sha256:f59eded163d9752fd49978e0bab7a1ff21b1b8d25c05f0995d140cc08ac83379",
+                "sha256:f5e2d36c86c7b03c94b8459c3bd2c9fe2c7dab4b258b8885617d44a22e453fb7",
+                "sha256:f6f65bf54215e4ebf6b01e4bb94c49180a589573df643735107056f7a910275b",
+                "sha256:f8450d5ef759dbe59f84f2c9f77491bb3d3c44bc1a573746daf086e70b14c243",
+                "sha256:f97d83049715fd9dec7911860ecf0e17b48d8725de01e45de07d8ac0bd5bc378"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
-            "version": "==0.18.2"
+            "markers": "python_version >= '3'",
+            "version": "==1.0.0"
         },
         "gunicorn": {
             "hashes": [
@@ -402,7 +386,6 @@
                 "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
                 "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.10"
         },
         "imagesize": {
@@ -410,7 +393,6 @@
                 "sha256:6965f19a6a2039c7d48bca7dba2473069ff854c36ae6f19d2cde309d998228a1",
                 "sha256:b1f6b5a4eab1f73479a50fb79fcf729514a900c341d8503d62a62dbc4127a2b1"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.2.0"
         },
         "inflection": {
@@ -418,15 +400,20 @@
                 "sha256:1a29730d366e996aaacffb2f1f1cb9593dc38e2ddd30c91250c6dde09ea9b417",
                 "sha256:f38b2b640938a4f35ade69ac3d053042959b62a0f1076a5bbaa1b9526605a8a2"
             ],
-            "markers": "python_version >= '3.5'",
             "version": "==0.5.1"
         },
+        "isodate": {
+            "hashes": [
+                "sha256:2e364a3d5759479cdb2d37cce6b9376ea504db2ff90252a2e5b7cc89cc9ff2d8",
+                "sha256:aa4d33c06640f5352aca96e4b81afd8ab3b47337cc12089822d6f322ac772c81"
+            ],
+            "version": "==0.6.0"
+        },
         "itsdangerous": {
             "hashes": [
                 "sha256:321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19",
                 "sha256:b12271b2047cb23eeb98c8b5622e2e5c5e9abd9784a153e9d8ef9cb4dd09d749"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.1.0"
         },
         "jdcal": {
@@ -441,7 +428,6 @@
                 "sha256:03e47ad063331dd6a3f04a43eddca8a966a26ba0c5b7207a9a9e4e08f1b29419",
                 "sha256:a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==2.11.3"
         },
         "jsonschema": {
@@ -451,20 +437,9 @@
             ],
             "version": "==3.2.0"
         },
-        "kombu": {
-            "hashes": [
-                "sha256:6dc509178ac4269b0e66ab4881f70a2035c33d3a622e20585f965986a5182006",
-                "sha256:f4965fba0a4718d47d470beeb5d6446e3357a62402b16c510b6a2f251e05ac3c"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.2"
-        },
         "ldap3": {
             "hashes": [
                 "sha256:18c3ee656a6775b9b0d60f7c6c5b094d878d1d90fc03d56731039f0a4b546a91",
-                "sha256:4139c91f0eef9782df7b77c8cbc6243086affcb6a8a249b768a9658438e5da59",
-                "sha256:8c949edbad2be8a03e719ba48bd6779f327ec156929562814b3e84ab56889c8c",
-                "sha256:afc6fc0d01f02af82cd7bfabd3bbfd5dc96a6ae91e97db0a2dab8a0f1b436056",
                 "sha256:c1df41d89459be6f304e0ceec4b00fdea533dbbcd83c802b1272dcdb94620b57"
             ],
             "index": "pypi",
@@ -472,52 +447,51 @@
         },
         "lxml": {
             "hashes": [
-                "sha256:0448576c148c129594d890265b1a83b9cd76fd1f0a6a04620753d9a6bcfd0a4d",
-                "sha256:127f76864468d6630e1b453d3ffbbd04b024c674f55cf0a30dc2595137892d37",
-                "sha256:1471cee35eba321827d7d53d104e7b8c593ea3ad376aa2df89533ce8e1b24a01",
-                "sha256:2363c35637d2d9d6f26f60a208819e7eafc4305ce39dc1d5005eccc4593331c2",
-                "sha256:2e5cc908fe43fe1aa299e58046ad66981131a66aea3129aac7770c37f590a644",
-                "sha256:2e6fd1b8acd005bd71e6c94f30c055594bbd0aa02ef51a22bbfa961ab63b2d75",
-                "sha256:366cb750140f221523fa062d641393092813b81e15d0e25d9f7c6025f910ee80",
-                "sha256:42ebca24ba2a21065fb546f3e6bd0c58c3fe9ac298f3a320147029a4850f51a2",
-                "sha256:4e751e77006da34643ab782e4a5cc21ea7b755551db202bc4d3a423b307db780",
-                "sha256:4fb85c447e288df535b17ebdebf0ec1cf3a3f1a8eba7e79169f4f37af43c6b98",
-                "sha256:50c348995b47b5a4e330362cf39fc503b4a43b14a91c34c83b955e1805c8e308",
-                "sha256:535332fe9d00c3cd455bd3dd7d4bacab86e2d564bdf7606079160fa6251caacf",
-                "sha256:535f067002b0fd1a4e5296a8f1bf88193080ff992a195e66964ef2a6cfec5388",
-                "sha256:5be4a2e212bb6aa045e37f7d48e3e1e4b6fd259882ed5a00786f82e8c37ce77d",
-                "sha256:60a20bfc3bd234d54d49c388950195d23a5583d4108e1a1d47c9eef8d8c042b3",
-                "sha256:648914abafe67f11be7d93c1a546068f8eff3c5fa938e1f94509e4a5d682b2d8",
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@@ -583,7 +557,6 @@
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@@ -637,16 +610,23 @@
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             "version": "==1.20.1"
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@@ -661,7 +641,6 @@
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@@ -688,14 +667,6 @@
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@@ -739,19 +710,8 @@
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@@ -760,7 +720,6 @@
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@@ -773,11 +732,10 @@
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@@ -792,14 +750,12 @@
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@@ -828,9 +784,7 @@
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@@ -862,17 +816,24 @@
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@@ -907,7 +868,6 @@
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@@ -919,11 +879,11 @@
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@@ -938,7 +898,6 @@
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@@ -946,7 +905,6 @@
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@@ -954,7 +912,6 @@
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@@ -962,7 +919,6 @@
                 "sha256:2ec2eaebfb78f3f2078e73666b1415417a116cc848b72e5172e596c871103178",
                 "sha256:a9925e4a4587247ed2191a22df5f6970656cb8ca2bd6284309578f2153e0c4b8"
             ],
-            "markers": "python_version >= '3.5'",
             "version": "==1.0.1"
         },
         "sphinxcontrib-qthelp": {
@@ -970,7 +926,6 @@
                 "sha256:4c33767ee058b70dba89a6fc5c1892c0d57a54be67ddd3e7875a18d14cba5a72",
                 "sha256:bd9fc24bcb748a8d51fd4ecaade681350aa63009a347a8c14e637895444dfab6"
             ],
-            "markers": "python_version >= '3.5'",
             "version": "==1.0.3"
         },
         "sphinxcontrib-serializinghtml": {
@@ -978,7 +933,6 @@
                 "sha256:eaa0eccc86e982a9b939b2b82d12cc5d013385ba5eadcc7e4fed23f4405f77bc",
                 "sha256:f242a81d423f59617a8e5cf16f5d4d74e28ee9a66f9e5b637a18082991db5a9a"
             ],
-            "markers": "python_version >= '3.5'",
             "version": "==1.1.4"
         },
         "spiffworkflow": {
@@ -987,47 +941,42 @@
         },
         "sqlalchemy": {
             "hashes": [
-                "sha256:040bdfc1d76a9074717a3f43455685f781c581f94472b010cd6c4754754e1862",
-                "sha256:1fe5d8d39118c2b018c215c37b73fd6893c3e1d4895be745ca8ff6eb83333ed3",
-                "sha256:23927c3981d1ec6b4ea71eb99d28424b874d9c696a21e5fbd9fa322718be3708",
-                "sha256:24f9569e82a009a09ce2d263559acb3466eba2617203170e4a0af91e75b4f075",
-                "sha256:2578dbdbe4dbb0e5126fb37ffcd9793a25dcad769a95f171a2161030bea850ff",
-                "sha256:269990b3ab53cb035d662dcde51df0943c1417bdab707dc4a7e4114a710504b4",
-                "sha256:29cccc9606750fe10c5d0e8bd847f17a97f3850b8682aef1f56f5d5e1a5a64b1",
-                "sha256:37b83bf81b4b85dda273aaaed5f35ea20ad80606f672d94d2218afc565fb0173",
-                "sha256:63677d0c08524af4c5893c18dbe42141de7178001360b3de0b86217502ed3601",
-                "sha256:639940bbe1108ac667dcffc79925db2966826c270112e9159439ab6bb14f8d80",
-                "sha256:6a939a868fdaa4b504e8b9d4a61f21aac11e3fecc8a8214455e144939e3d2aea",
-                "sha256:6b8b8c80c7f384f06825612dd078e4a31f0185e8f1f6b8c19e188ff246334205",
-                "sha256:6c9e6cc9237de5660bcddea63f332428bb83c8e2015c26777281f7ffbd2efb84",
-                "sha256:6ec1044908414013ebfe363450c22f14698803ce97fbb47e53284d55c5165848",
-                "sha256:6fca33672578666f657c131552c4ef8979c1606e494f78cd5199742dfb26918b",
-                "sha256:751934967f5336a3e26fc5993ccad1e4fee982029f9317eb6153bc0bc3d2d2da",
-                "sha256:8be835aac18ec85351385e17b8665bd4d63083a7160a017bef3d640e8e65cadb",
-                "sha256:927ce09e49bff3104459e1451ce82983b0a3062437a07d883a4c66f0b344c9b5",
-                "sha256:94208867f34e60f54a33a37f1c117251be91a47e3bfdb9ab8a7847f20886ad06",
-                "sha256:94f667d86be82dd4cb17d08de0c3622e77ca865320e0b95eae6153faa7b4ecaf",
-                "sha256:9e9c25522933e569e8b53ccc644dc993cab87e922fb7e142894653880fdd419d",
-                "sha256:a0e306e9bb76fd93b29ae3a5155298e4c1b504c7cbc620c09c20858d32d16234",
-                "sha256:a8bfc1e1afe523e94974132d7230b82ca7fa2511aedde1f537ec54db0399541a",
-                "sha256:ac2244e64485c3778f012951fdc869969a736cd61375fde6096d08850d8be729",
-                "sha256:b4b0e44d586cd64b65b507fa116a3814a1a53d55dce4836d7c1a6eb2823ff8d1",
-                "sha256:baeb451ee23e264de3f577fee5283c73d9bbaa8cb921d0305c0bbf700094b65b",
-                "sha256:c7dc052432cd5d060d7437e217dd33c97025287f99a69a50e2dc1478dd610d64",
-                "sha256:d1a85dfc5dee741bf49cb9b6b6b8d2725a268e4992507cf151cba26b17d97c37",
-                "sha256:d90010304abb4102123d10cbad2cdf2c25a9f2e66a50974199b24b468509bad5",
-                "sha256:ddfb511e76d016c3a160910642d57f4587dc542ce5ee823b0d415134790eeeb9",
-                "sha256:e273367f4076bd7b9a8dc2e771978ef2bfd6b82526e80775a7db52bff8ca01dd",
-                "sha256:e5bb3463df697279e5459a7316ad5a60b04b0107f9392e88674d0ece70e9cf70",
-                "sha256:e8a1750b44ad6422ace82bf3466638f1aa0862dbb9689690d5f2f48cce3476c8",
-                "sha256:eab063a70cca4a587c28824e18be41d8ecc4457f8f15b2933584c6c6cccd30f0",
-                "sha256:ecce8c021894a77d89808222b1ff9687ad84db54d18e4bd0500ca766737faaf6",
-                "sha256:f4d972139d5000105fcda9539a76452039434013570d6059993120dc2a65e447",
-                "sha256:fd3b96f8c705af8e938eaa99cbd8fd1450f632d38cad55e7367c33b263bf98ec",
-                "sha256:fdd2ed7395df8ac2dbb10cefc44737b66c6a5cd7755c92524733d7a443e5b7e2"
+                "sha256:0096305b3e0912c59d8308f55d17544b3e5c1787f5ad8ef9cd75084136bcba9c",
+                "sha256:106fd3da313390dffe6ca156e5b7244293d6f4bfd389bcb315771c7addb5f3b3",
+                "sha256:1b30b71ea7c0f854d1b31549816694d8c435c9b5cce44da140b473544bb48a6b",
+                "sha256:228fe0cc700748ccc7a9a430896a77dfaa8a1035874e540961589e31f31cabe1",
+                "sha256:22faab9884c46ea2c00d5457a6a23375e0b4ab5257b72a27c8b979d4f677d4cf",
+                "sha256:3280c283e85e5c7b95c7be75b2df765d4bb13a01be36552826557bb4177d2bdf",
+                "sha256:33a2b756bd8f7022c24a16228071dea39cf6f21f62732a5307b6ebcef084bf16",
+                "sha256:409f3cd35f99592d0ceb1ee2e13c24b3083109e0f80096aae36000e5988aa24a",
+                "sha256:41a6dc66714c7dddf210dc8652d19bb2a55364c21038ca77312500014271aa67",
+                "sha256:4aa4de9bd3ae5e46f7395aa769303722e7174795ae83dd78302d849fcbc7513d",
+                "sha256:52c2512914bdeb3ce7957e2597b6a9d4a3dd3b3177c32ccf481908d6e59384ae",
+                "sha256:5da7f97893631d060c4590e531784f5eaf64bb3e6002804ee8a96d9c91cd1885",
+                "sha256:655b35725f1478bb6f797336acc803ddbb4c693816b3663a6fd94ad454eb056a",
+                "sha256:755aed46915e20c0b317a4124251f31682dcc7a43984d771352f6863ea11cd9c",
+                "sha256:81920161039cca14dac30378713c472a0ac5e783b2077984d6f8ec6f2d824356",
+                "sha256:83e65d8826bc649f8af556588555b744d4b9cfc0fcda8f3ddd08fe43c656e459",
+                "sha256:8761759028eb7754b76ca153e613bdea0fb6f8107557e57c60616a7212e2a297",
+                "sha256:8cf28097524b7fff3526df9154abcdbed0c4e434d4c4e6787e3d4fc33e7deb6a",
+                "sha256:92cca0c8757ac9a8a53cc800ea0f04a4f6c346376bc4cb878e4a6aed6f19d18d",
+                "sha256:96e68231f7115f5acb1bb51ccec26351bc155fedf835d7625fa203a43c8a3762",
+                "sha256:9852a7b4feee4c7de4b7541fa8a72ab36a5dad7942c58006e76ffe59c0f8efec",
+                "sha256:a719b80b41a900bbcec3cc248616394ebd134043ce5e62185270d785d8a184d3",
+                "sha256:a91fa4189f66af9644fde50740c5134689dc01c6c5edf04af6eafa3225ae110c",
+                "sha256:aa529647a3770293f392dff40466344a5d142fe66a2bbec465247a05d695eced",
+                "sha256:ad2d9fc0ffba476cf069cea558527bc23e1ced24ec6c8badab8aa63cbde56b07",
+                "sha256:b445fe8f043288178bc7d4adda49a505de86641864d50493d3fad10e0711cbff",
+                "sha256:b529f285b04094d458e811147a320019397909265eef1d1aa9dc6ecac0ad240c",
+                "sha256:bce476fd66aeaeb1a155f97838233d95fccd2c611da4d6b1cb4b6205435e5326",
+                "sha256:be1df71f9a06730b2a7213b68d6c465130a82305789462e375cf87037b181af3",
+                "sha256:c063277efd89c7f755480ff80f87828c9a68afb0fdc6d79462b9e474301fded3",
+                "sha256:d157a87dcd861eae04cd9b19cac535451719397fcae7b6f870688d8fb69d84f9",
+                "sha256:d34afc46b9fe3025b8db7ade6876bf80668918c5cdcdae067aaec348b5daa821",
+                "sha256:e337983564e09857a7a687dfa7adfaf85f59ed9e885d30081e13aea792d6abf7",
+                "sha256:e8b24bb68e981b6a2a8845d6d0f85891564d38562fc338170338ef90a221241e"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
-            "version": "==1.3.23"
+            "version": "==1.4.3"
         },
         "swagger-ui-bundle": {
             "hashes": [
@@ -1039,42 +988,24 @@
         },
         "urllib3": {
             "hashes": [
-                "sha256:1b465e494e3e0d8939b50680403e3aedaa2bc434b7d5af64dfd3c958d7f5ae80",
-                "sha256:de3eedaad74a2683334e282005cd8d7f22f4d55fa690a2a1020a416cb0a47e73"
+                "sha256:2f4da4594db7e1e110a944bb1b551fdf4e6c136ad42e4234131391e21eb5b0df",
+                "sha256:e7b021f7241115872f92f43c6508082facffbd1c048e3c6e2bb9c2a157e28937"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'",
-            "version": "==1.26.3"
-        },
-        "vine": {
-            "hashes": [
-                "sha256:4c9dceab6f76ed92105027c49c823800dd33cacce13bdedc5b914e3514b7fb30",
-                "sha256:7d3b1624a953da82ef63462013bbd271d3eb75751489f9807598e8f340bd637e"
-            ],
-            "markers": "python_version >= '3.6'",
-            "version": "==5.0.0"
+            "version": "==1.26.4"
         },
         "waitress": {
             "hashes": [
-                "sha256:1bb436508a7487ac6cb097ae7a7fe5413aefca610550baf58f0940e51ecfb261",
-                "sha256:3d633e78149eb83b60a07dfabb35579c29aac2d24bb803c18b26fb2ab1a584db"
+                "sha256:29af5a53e9fb4e158f525367678b50053808ca6c21ba585754c77d790008c746",
+                "sha256:69e1f242c7f80273490d3403c3976f3ac3b26e289856936d1f620ed48f321897"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
-            "version": "==1.4.4"
-        },
-        "wcwidth": {
-            "hashes": [
-                "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784",
-                "sha256:c4d647b99872929fdb7bdcaa4fbe7f01413ed3d98077df798530e5b04f116c83"
-            ],
-            "version": "==0.2.5"
+            "version": "==2.0.0"
         },
         "webob": {
             "hashes": [
-                "sha256:a3c89a8e9ba0aeb17382836cdb73c516d0ecf6630ec40ec28288f3ed459ce87b",
-                "sha256:aa3a917ed752ba3e0b242234b2a373f9c4e2a75d35291dcbe977649bd21fd108"
+                "sha256:73aae30359291c14fa3b956f8b5ca31960e420c28c1bec002547fb04928cf89b",
+                "sha256:b64ef5141be559cfade448f044fa45c2260351edcb6a8ef6b7e00c7dcef0c323"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
-            "version": "==1.8.6"
+            "version": "==1.8.7"
         },
         "webtest": {
             "hashes": [
@@ -1128,7 +1059,6 @@
                 "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
                 "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.3.0"
         },
         "coverage": {
@@ -1198,7 +1128,6 @@
                 "sha256:5b327ac1320dc863dca72f4514ecc086f31186744b84a230374cc1fd776feae5",
                 "sha256:67714da7f7bc052e064859c05c595155bd1ee9f69f76557e21f051443c20947a"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.9"
         },
         "pbr": {
@@ -1214,7 +1143,6 @@
                 "sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0",
                 "sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==0.13.1"
         },
         "py": {
@@ -1222,7 +1150,6 @@
                 "sha256:21b81bda15b66ef5e1a777a21c4dcd9c20ad3efd0b3f817e7a809035269e1bd3",
                 "sha256:3b80836aa6d1feeaa108e046da6423ab8f6ceda6468545ae8d02d9d58d18818a"
             ],
-            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.10.0"
         },
         "pyparsing": {
@@ -1230,7 +1157,6 @@
                 "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1",
                 "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
             "version": "==2.4.7"
         },
         "pytest": {
@@ -1246,7 +1172,6 @@
                 "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b",
                 "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"
             ],
-            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2'",
             "version": "==0.10.2"
         }
     }

From 0feee28ba1cf63d8d2bf76c836549b169d61f770 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Mon, 29 Mar 2021 23:39:17 +0000
Subject: [PATCH 05/11] Bump pygments from 2.7.2 to 2.7.4 in /deploy

Bumps [pygments](https://github.com/pygments/pygments) from 2.7.2 to 2.7.4.
- [Release notes](https://github.com/pygments/pygments/releases)
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES)
- [Commits](https://github.com/pygments/pygments/compare/2.7.2...2.7.4)

Signed-off-by: dependabot[bot] <support@github.com>
---
 deploy/requirements.txt | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/deploy/requirements.txt b/deploy/requirements.txt
index f20a4a5c..e8e6bb61 100644
--- a/deploy/requirements.txt
+++ b/deploy/requirements.txt
@@ -53,7 +53,7 @@ psycopg2-binary==2.8.6
 pyasn1==0.4.8
 pycparser==2.20
 pygithub==1.53
-pygments==2.7.2
+pygments==2.7.4
 pyjwt==1.7.1
 pyparsing==2.4.7
 pyrsistent==0.17.3

From 60f5be1aefcde17b194e1dbe458b5fddc6cdbe42 Mon Sep 17 00:00:00 2001
From: Kelly McDonald <kelly@fammcdonald.net>
Date: Tue, 30 Mar 2021 12:10:49 -0400
Subject: [PATCH 06/11] Check in - pending change from @cullerton

---
 crc/scripts/study_info.py               | 19 ++++++++++---------
 crc/services/cache_service.py           |  9 +++++++++
 crc/services/study_service.py           |  4 +++-
 crc/services/workflow_processor.py      |  8 +++++++-
 crc/services/workflow_service.py        |  2 +-
 tests/study/test_update_study_script.py |  3 ++-
 tests/test_tasks_api.py                 |  2 +-
 7 files changed, 33 insertions(+), 14 deletions(-)

diff --git a/crc/scripts/study_info.py b/crc/scripts/study_info.py
index 90bbd866..cabcb35a 100644
--- a/crc/scripts/study_info.py
+++ b/crc/scripts/study_info.py
@@ -6,10 +6,10 @@ from crc.models.protocol_builder import ProtocolBuilderInvestigatorType
 from crc.models.study import StudyModel, StudySchema
 from crc.models.workflow import WorkflowStatus
 from crc.scripts.script import Script
+from crc.services.cache_service import timeit
 from crc.services.file_service import FileService
 from crc.services.protocol_builder import ProtocolBuilderService
 from crc.services.study_service import StudyService
-from box import Box
 
 class StudyInfo(Script):
     """Please see the detailed description that is provided below. """
@@ -181,7 +181,7 @@ Returns information specific to the protocol.
         # Assure the reference file exists (a bit hacky, but we want to raise this error early, and cleanly.)
         FileService.get_reference_file_data(FileService.DOCUMENT_LIST)
         FileService.get_reference_file_data(FileService.INVESTIGATOR_LIST)
-        data = Box({
+        data = {
             "study":{
                 "info": {
                     "id": 12,
@@ -373,13 +373,14 @@ Returns information specific to the protocol.
                     'id': 0,
                 }
             }
-        })
+        }
         if args[0]=='documents':
             return StudyService().get_documents_status(study_id)
         return data['study'][args[0]]
         #self.add_data_to_task(task=task, data=data["study"])
         #self.add_data_to_task(task, {"documents": StudyService().get_documents_status(study_id)})
 
+    @timeit
     def do_task(self, task, study_id, workflow_id, *args, **kwargs):
         self.check_args(args,2)
         prefix = None
@@ -408,12 +409,12 @@ Returns information specific to the protocol.
             retval = StudyService().get_documents_status(study_id)
         if cmd == 'protocol':
             retval = StudyService().get_protocol(study_id)
-        if isinstance(retval, list):
-            retval = [Box(item) for item in retval]
-        if isinstance(retval,dict) and prefix is not None:
-            return Box({x:retval[x] for x in retval.keys() if x[:len(prefix)] == prefix})
-        elif isinstance(retval,dict) :
-            return Box(retval)
+#        if isinstance(retval, list):
+#            retval = [Box(item) for item in retval]
+#        if isinstance(retval,dict) and prefix is not None:
+#            return Box({x:retval[x] for x in retval.keys() if x[:len(prefix)] == prefix})
+#        elif isinstance(retval,dict) :
+#            return Box(retval)
         else:
             return retval
 
diff --git a/crc/services/cache_service.py b/crc/services/cache_service.py
index 366b750c..ea6b1a6b 100644
--- a/crc/services/cache_service.py
+++ b/crc/services/cache_service.py
@@ -4,6 +4,15 @@ cache_store = {}
 
 import time
 
+
+def firsttime():
+    return time.time()
+
+def sincetime(txt,lasttime):
+    thistime=firsttime()
+    print('%s runtime was %2f'%(txt,thistime-lasttime))
+    return thistime
+
 def timeit(f):
 
     def timed(*args, **kw):
diff --git a/crc/services/study_service.py b/crc/services/study_service.py
index 895703c7..ed56d595 100644
--- a/crc/services/study_service.py
+++ b/crc/services/study_service.py
@@ -1,7 +1,7 @@
 from copy import copy
 from datetime import datetime
 from typing import List
-
+from crc.services.cache_service import timeit
 import requests
 from SpiffWorkflow import WorkflowException
 from SpiffWorkflow.exceptions import WorkflowTaskExecException
@@ -53,6 +53,7 @@ class StudyService(object):
         return studies
 
     @staticmethod
+    @timeit
     def get_study(study_id, study_model: StudyModel = None, do_status=True):
         """Returns a study model that contains all the workflows organized by category.
         IMPORTANT:  This is intended to be a lightweight call, it should never involve
@@ -447,6 +448,7 @@ class StudyService(object):
         return workflow_metas
 
     @staticmethod
+    @timeit
     def __get_study_status(study_model):
         """Uses the Top Level Workflow to calculate the status of the study, and it's
         workflow models."""
diff --git a/crc/services/workflow_processor.py b/crc/services/workflow_processor.py
index 56eb1e89..9016b807 100644
--- a/crc/services/workflow_processor.py
+++ b/crc/services/workflow_processor.py
@@ -28,7 +28,7 @@ from crc.scripts.script import Script
 from crc.services.file_service import FileService
 from crc import app
 from crc.services.user_service import UserService
-
+from crc.services.cache_service import timeit, firsttime, sincetime
 
 class CustomBpmnScriptEngine(BpmnScriptEngine):
     """This is a custom script processor that can be easily injected into Spiff Workflow.
@@ -277,16 +277,22 @@ class WorkflowProcessor(object):
             self.workflow_model.dependencies.append(WorkflowSpecDependencyFile(file_data_id=file_data.id))
 
     @staticmethod
+    @timeit
     def run_master_spec(spec_model, study):
         """Executes a BPMN specification for the given study, without recording any information to the database
         Useful for running the master specification, which should not persist. """
+        lasttime = firsttime()
         spec_data_files = FileService.get_spec_data_files(spec_model.id)
+        lasttime = sincetime('load Files', lasttime)
         spec = WorkflowProcessor.get_spec(spec_data_files, spec_model.id)
+        lasttime = sincetime('get spec', lasttime)
         try:
             bpmn_workflow = BpmnWorkflow(spec, script_engine=WorkflowProcessor._script_engine)
             bpmn_workflow.data[WorkflowProcessor.STUDY_ID_KEY] = study.id
             bpmn_workflow.data[WorkflowProcessor.VALIDATION_PROCESS_KEY] = False
+            lasttime = sincetime('get_workflow', lasttime)
             bpmn_workflow.do_engine_steps()
+            lasttime = sincetime('run steps', lasttime)
         except WorkflowException as we:
             raise ApiError.from_task_spec("error_running_master_spec", str(we), we.sender)
 
diff --git a/crc/services/workflow_service.py b/crc/services/workflow_service.py
index cc73e383..291004a4 100644
--- a/crc/services/workflow_service.py
+++ b/crc/services/workflow_service.py
@@ -16,7 +16,7 @@ from SpiffWorkflow.bpmn.specs.UserTask import UserTask
 from SpiffWorkflow.dmn.specs.BusinessRuleTask import BusinessRuleTask
 from SpiffWorkflow.specs import CancelTask, StartTask, MultiChoice
 from SpiffWorkflow.util.deep_merge import DeepMerge
-from box import Box
+
 from jinja2 import Template
 
 from crc import db, app
diff --git a/tests/study/test_update_study_script.py b/tests/study/test_update_study_script.py
index 6e46fdee..36d516d9 100644
--- a/tests/study/test_update_study_script.py
+++ b/tests/study/test_update_study_script.py
@@ -2,7 +2,8 @@ from tests.base_test import BaseTest
 
 from crc.scripts.update_study import UpdateStudy
 from crc.services.workflow_processor import WorkflowProcessor
-from box import Box
+from SpiffWorkflow.bpmn.PythonScriptEngine import Box
+
 
 class TestUpdateStudyScript(BaseTest):
 
diff --git a/tests/test_tasks_api.py b/tests/test_tasks_api.py
index 97b14388..f2742960 100644
--- a/tests/test_tasks_api.py
+++ b/tests/test_tasks_api.py
@@ -10,7 +10,7 @@ from crc.models.api_models import WorkflowApiSchema, MultiInstanceType, TaskSche
 from crc.models.file import FileModelSchema
 from crc.models.workflow import WorkflowStatus
 from crc.models.task_event import TaskEventModel
-
+from SpiffWorkflow.bpmn.PythonScriptEngine import Box
 
 class TestTasksApi(BaseTest):
 

From 9084866015e73140cf022b3a2cc6eb5efd93cc10 Mon Sep 17 00:00:00 2001
From: Kelly McDonald <kelly@fammcdonald.net>
Date: Wed, 31 Mar 2021 10:17:08 -0400
Subject: [PATCH 07/11] Update error message - it may be that we should spend a
 bit and see if we can make the Box error

---
 crc/services/error_service.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/crc/services/error_service.py b/crc/services/error_service.py
index bbdd87fb..2d66f0eb 100644
--- a/crc/services/error_service.py
+++ b/crc/services/error_service.py
@@ -17,7 +17,8 @@ generic_message = """Workflow validation failed. For more information about the
 known_errors = {'Error is Non-default exclusive outgoing sequence flow  without condition':
                 {'hint': 'Add a Condition Type to your gateway path.'},
 
-                'Could not set task title on task (\w+) with \'(.*)\' property because \\1: Error evaluating expression \'(.*)\', "\'Box\' object has no attribute \'\\2\'"$':
+                'Could not set task title on task (\w+) with \'(.*)\' property because \\1: Error evaluating '
+                'expression \'(.*)\', $':
                 {'hint': 'You are overriding the title for task `{task_id}`, using the `{property}` extension, and it is causing an error.  Look under the extensions tab for the task, and check the value you are setting for the property.',
                  'groups': {'task_id': 0, 'property': 1}}}
 

From 2100f27976cab4723f03f8eed6f56706431cfed7 Mon Sep 17 00:00:00 2001
From: Dan <daniel.h.funk@gmail.com>
Date: Fri, 2 Apr 2021 17:10:05 -0400
Subject: [PATCH 08/11] fixing the api.yml file which was starting to throw
 errors when updating the libraries. Seems that sqlalchemy now has a hard time
 incrementing sequences, so putting in a fix for this. Upgrading many of our
 libraries, to avoid any disconnects as we try to handle security patches from
 these automated bumps.

---
 Pipfile.lock                              | 416 +++++++++++-----------
 crc/api.yml                               |  26 +-
 tests/base_test.py                        |   6 +-
 tests/workflow/test_workflow_processor.py |   4 +-
 4 files changed, 226 insertions(+), 226 deletions(-)

diff --git a/Pipfile.lock b/Pipfile.lock
index d0246927..0776d7c5 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -25,11 +25,11 @@
         },
         "alembic": {
             "hashes": [
-                "sha256:422883bf429105b9b5f1fece6d79da64ed1ee648af2ef256d9b52edac236bc46",
-                "sha256:e871118b6174681f7e9a9ea67cfcae954c6d18e05b49c6b17f662d2530c76bf5"
+                "sha256:8a259f0a4c8b350b03579d77ce9e810b19c65bf0af05f84efb69af13ad50801e",
+                "sha256:e27fd67732c97a1c370c33169ef4578cf96436fa0e7dcfaeeef4a917d0737d56"
             ],
             "index": "pypi",
-            "version": "==1.5.4"
+            "version": "==1.5.8"
         },
         "aniso8601": {
             "hashes": [
@@ -168,58 +168,61 @@
         },
         "coverage": {
             "hashes": [
-                "sha256:03ed2a641e412e42cc35c244508cf186015c217f0e4d496bf6d7078ebe837ae7",
-                "sha256:04b14e45d6a8e159c9767ae57ecb34563ad93440fc1b26516a89ceb5b33c1ad5",
-                "sha256:0cdde51bfcf6b6bd862ee9be324521ec619b20590787d1655d005c3fb175005f",
-                "sha256:0f48fc7dc82ee14aeaedb986e175a429d24129b7eada1b7e94a864e4f0644dde",
-                "sha256:107d327071061fd4f4a2587d14c389a27e4e5c93c7cba5f1f59987181903902f",
-                "sha256:1375bb8b88cb050a2d4e0da901001347a44302aeadb8ceb4b6e5aa373b8ea68f",
-                "sha256:14a9f1887591684fb59fdba8feef7123a0da2424b0652e1b58dd5b9a7bb1188c",
-                "sha256:16baa799ec09cc0dcb43a10680573269d407c159325972dd7114ee7649e56c66",
-                "sha256:1b811662ecf72eb2d08872731636aee6559cae21862c36f74703be727b45df90",
-                "sha256:1ccae21a076d3d5f471700f6d30eb486da1626c380b23c70ae32ab823e453337",
-                "sha256:2f2cf7a42d4b7654c9a67b9d091ec24374f7c58794858bff632a2039cb15984d",
-                "sha256:322549b880b2d746a7672bf6ff9ed3f895e9c9f108b714e7360292aa5c5d7cf4",
-                "sha256:32ab83016c24c5cf3db2943286b85b0a172dae08c58d0f53875235219b676409",
-                "sha256:3fe50f1cac369b02d34ad904dfe0771acc483f82a1b54c5e93632916ba847b37",
-                "sha256:4a780807e80479f281d47ee4af2eb2df3e4ccf4723484f77da0bb49d027e40a1",
-                "sha256:4a8eb7785bd23565b542b01fb39115a975fefb4a82f23d407503eee2c0106247",
-                "sha256:5bee3970617b3d74759b2d2df2f6a327d372f9732f9ccbf03fa591b5f7581e39",
-                "sha256:60a3307a84ec60578accd35d7f0c71a3a971430ed7eca6567399d2b50ef37b8c",
-                "sha256:6625e52b6f346a283c3d563d1fd8bae8956daafc64bb5bbd2b8f8a07608e3994",
-                "sha256:66a5aae8233d766a877c5ef293ec5ab9520929c2578fd2069308a98b7374ea8c",
-                "sha256:68fb816a5dd901c6aff352ce49e2a0ffadacdf9b6fae282a69e7a16a02dad5fb",
-                "sha256:6b588b5cf51dc0fd1c9e19f622457cc74b7d26fe295432e434525f1c0fae02bc",
-                "sha256:6c4d7165a4e8f41eca6b990c12ee7f44fef3932fac48ca32cecb3a1b2223c21f",
-                "sha256:6d2e262e5e8da6fa56e774fb8e2643417351427604c2b177f8e8c5f75fc928ca",
-                "sha256:6d9c88b787638a451f41f97446a1c9fd416e669b4d9717ae4615bd29de1ac135",
-                "sha256:755c56beeacac6a24c8e1074f89f34f4373abce8b662470d3aa719ae304931f3",
-                "sha256:7e40d3f8eb472c1509b12ac2a7e24158ec352fc8567b77ab02c0db053927e339",
-                "sha256:812eaf4939ef2284d29653bcfee9665f11f013724f07258928f849a2306ea9f9",
-                "sha256:84df004223fd0550d0ea7a37882e5c889f3c6d45535c639ce9802293b39cd5c9",
-                "sha256:859f0add98707b182b4867359e12bde806b82483fb12a9ae868a77880fc3b7af",
-                "sha256:87c4b38288f71acd2106f5d94f575bc2136ea2887fdb5dfe18003c881fa6b370",
-                "sha256:89fc12c6371bf963809abc46cced4a01ca4f99cba17be5e7d416ed7ef1245d19",
-                "sha256:9564ac7eb1652c3701ac691ca72934dd3009997c81266807aef924012df2f4b3",
-                "sha256:9754a5c265f991317de2bac0c70a746efc2b695cf4d49f5d2cddeac36544fb44",
-                "sha256:a565f48c4aae72d1d3d3f8e8fb7218f5609c964e9c6f68604608e5958b9c60c3",
-                "sha256:a636160680c6e526b84f85d304e2f0bb4e94f8284dd765a1911de9a40450b10a",
-                "sha256:a839e25f07e428a87d17d857d9935dd743130e77ff46524abb992b962eb2076c",
-                "sha256:b62046592b44263fa7570f1117d372ae3f310222af1fc1407416f037fb3af21b",
-                "sha256:b7f7421841f8db443855d2854e25914a79a1ff48ae92f70d0a5c2f8907ab98c9",
-                "sha256:ba7ca81b6d60a9f7a0b4b4e175dcc38e8fef4992673d9d6e6879fd6de00dd9b8",
-                "sha256:bb32ca14b4d04e172c541c69eec5f385f9a075b38fb22d765d8b0ce3af3a0c22",
-                "sha256:c0ff1c1b4d13e2240821ef23c1efb1f009207cb3f56e16986f713c2b0e7cd37f",
-                "sha256:c669b440ce46ae3abe9b2d44a913b5fd86bb19eb14a8701e88e3918902ecd345",
-                "sha256:c67734cff78383a1f23ceba3b3239c7deefc62ac2b05fa6a47bcd565771e5880",
-                "sha256:c6809ebcbf6c1049002b9ac09c127ae43929042ec1f1dbd8bb1615f7cd9f70a0",
-                "sha256:cd601187476c6bed26a0398353212684c427e10a903aeafa6da40c63309d438b",
-                "sha256:ebfa374067af240d079ef97b8064478f3bf71038b78b017eb6ec93ede1b6bcec",
-                "sha256:fbb17c0d0822684b7d6c09915677a32319f16ff1115df5ec05bdcaaee40b35f3",
-                "sha256:fff1f3a586246110f34dc762098b5afd2de88de507559e63553d7da643053786"
+                "sha256:004d1880bed2d97151facef49f08e255a20ceb6f9432df75f4eef018fdd5a78c",
+                "sha256:01d84219b5cdbfc8122223b39a954820929497a1cb1422824bb86b07b74594b6",
+                "sha256:040af6c32813fa3eae5305d53f18875bedd079960822ef8ec067a66dd8afcd45",
+                "sha256:06191eb60f8d8a5bc046f3799f8a07a2d7aefb9504b0209aff0b47298333302a",
+                "sha256:13034c4409db851670bc9acd836243aeee299949bd5673e11844befcb0149f03",
+                "sha256:13c4ee887eca0f4c5a247b75398d4114c37882658300e153113dafb1d76de529",
+                "sha256:184a47bbe0aa6400ed2d41d8e9ed868b8205046518c52464fde713ea06e3a74a",
+                "sha256:18ba8bbede96a2c3dde7b868de9dcbd55670690af0988713f0603f037848418a",
+                "sha256:1aa846f56c3d49205c952d8318e76ccc2ae23303351d9270ab220004c580cfe2",
+                "sha256:217658ec7187497e3f3ebd901afdca1af062b42cfe3e0dafea4cced3983739f6",
+                "sha256:24d4a7de75446be83244eabbff746d66b9240ae020ced65d060815fac3423759",
+                "sha256:2910f4d36a6a9b4214bb7038d537f015346f413a975d57ca6b43bf23d6563b53",
+                "sha256:2949cad1c5208b8298d5686d5a85b66aae46d73eec2c3e08c817dd3513e5848a",
+                "sha256:2a3859cb82dcbda1cfd3e6f71c27081d18aa251d20a17d87d26d4cd216fb0af4",
+                "sha256:2cafbbb3af0733db200c9b5f798d18953b1a304d3f86a938367de1567f4b5bff",
+                "sha256:2e0d881ad471768bf6e6c2bf905d183543f10098e3b3640fc029509530091502",
+                "sha256:30c77c1dc9f253283e34c27935fded5015f7d1abe83bc7821680ac444eaf7793",
+                "sha256:3487286bc29a5aa4b93a072e9592f22254291ce96a9fbc5251f566b6b7343cdb",
+                "sha256:372da284cfd642d8e08ef606917846fa2ee350f64994bebfbd3afb0040436905",
+                "sha256:41179b8a845742d1eb60449bdb2992196e211341818565abded11cfa90efb821",
+                "sha256:44d654437b8ddd9eee7d1eaee28b7219bec228520ff809af170488fd2fed3e2b",
+                "sha256:4a7697d8cb0f27399b0e393c0b90f0f1e40c82023ea4d45d22bce7032a5d7b81",
+                "sha256:51cb9476a3987c8967ebab3f0fe144819781fca264f57f89760037a2ea191cb0",
+                "sha256:52596d3d0e8bdf3af43db3e9ba8dcdaac724ba7b5ca3f6358529d56f7a166f8b",
+                "sha256:53194af30d5bad77fcba80e23a1441c71abfb3e01192034f8246e0d8f99528f3",
+                "sha256:5fec2d43a2cc6965edc0bb9e83e1e4b557f76f843a77a2496cbe719583ce8184",
+                "sha256:6c90e11318f0d3c436a42409f2749ee1a115cd8b067d7f14c148f1ce5574d701",
+                "sha256:74d881fc777ebb11c63736622b60cb9e4aee5cace591ce274fb69e582a12a61a",
+                "sha256:7501140f755b725495941b43347ba8a2777407fc7f250d4f5a7d2a1050ba8e82",
+                "sha256:796c9c3c79747146ebd278dbe1e5c5c05dd6b10cc3bcb8389dfdf844f3ead638",
+                "sha256:869a64f53488f40fa5b5b9dcb9e9b2962a66a87dab37790f3fcfb5144b996ef5",
+                "sha256:8963a499849a1fc54b35b1c9f162f4108017b2e6db2c46c1bed93a72262ed083",
+                "sha256:8d0a0725ad7c1a0bcd8d1b437e191107d457e2ec1084b9f190630a4fb1af78e6",
+                "sha256:900fbf7759501bc7807fd6638c947d7a831fc9fdf742dc10f02956ff7220fa90",
+                "sha256:92b017ce34b68a7d67bd6d117e6d443a9bf63a2ecf8567bb3d8c6c7bc5014465",
+                "sha256:970284a88b99673ccb2e4e334cfb38a10aab7cd44f7457564d11898a74b62d0a",
+                "sha256:972c85d205b51e30e59525694670de6a8a89691186012535f9d7dbaa230e42c3",
+                "sha256:9a1ef3b66e38ef8618ce5fdc7bea3d9f45f3624e2a66295eea5e57966c85909e",
+                "sha256:af0e781009aaf59e25c5a678122391cb0f345ac0ec272c7961dc5455e1c40066",
+                "sha256:b6d534e4b2ab35c9f93f46229363e17f63c53ad01330df9f2d6bd1187e5eaacf",
+                "sha256:b7895207b4c843c76a25ab8c1e866261bcfe27bfaa20c192de5190121770672b",
+                "sha256:c0891a6a97b09c1f3e073a890514d5012eb256845c451bd48f7968ef939bf4ae",
+                "sha256:c2723d347ab06e7ddad1a58b2a821218239249a9e4365eaff6649d31180c1669",
+                "sha256:d1f8bf7b90ba55699b3a5e44930e93ff0189aa27186e96071fac7dd0d06a1873",
+                "sha256:d1f9ce122f83b2305592c11d64f181b87153fc2c2bbd3bb4a3dde8303cfb1a6b",
+                "sha256:d314ed732c25d29775e84a960c3c60808b682c08d86602ec2c3008e1202e3bb6",
+                "sha256:d636598c8305e1f90b439dbf4f66437de4a5e3c31fdf47ad29542478c8508bbb",
+                "sha256:deee1077aae10d8fa88cb02c845cfba9b62c55e1183f52f6ae6a2df6a2187160",
+                "sha256:ebe78fe9a0e874362175b02371bdfbee64d8edc42a044253ddf4ee7d3c15212c",
+                "sha256:f030f8873312a16414c0d8e1a1ddff2d3235655a2174e3648b4fa66b3f2f1079",
+                "sha256:f0b278ce10936db1a37e6954e15a3730bea96a0997c26d7fee88e6c396c2086d",
+                "sha256:f11642dddbb0253cc8853254301b51390ba0081750a8ac03f20ea8103f0c56b6"
             ],
             "index": "pypi",
-            "version": "==5.4"
+            "version": "==5.5"
         },
         "deprecated": {
             "hashes": [
@@ -296,11 +299,11 @@
         },
         "flask-migrate": {
             "hashes": [
-                "sha256:8626af845e6071ef80c70b0dc16d373f761c981f0ad61bb143a529cab649e725",
-                "sha256:c1601dfd46b9204233935e5d73473cd7fa959db7a4b0e894c7aa7a9e8aeebf0e"
+                "sha256:26871836a4e46d2d590cf8e558c6d60039e1c003079b240689d845726b6b57c0",
+                "sha256:ae2f05671588762dd83a21d8b18c51fe355e86783e24594995ff8d7380dffe38"
             ],
             "index": "pypi",
-            "version": "==2.6.0"
+            "version": "==2.7.0"
         },
         "flask-restful": {
             "hashes": [
@@ -368,11 +371,10 @@
         },
         "gunicorn": {
             "hashes": [
-                "sha256:1904bb2b8a43658807108d59c3f3d56c2b6121a701161de0ddf9ad140073c626",
-                "sha256:cd4a810dd51bf497552cf3f863b575dabd73d6ad6a91075b65936b151cbf4f9c"
+                "sha256:e0a968b5ba15f8a328fdfd7ab1fcb5af4470c28aaf7e55df02a99bc13138e6e8"
             ],
             "index": "pypi",
-            "version": "==20.0.4"
+            "version": "==20.1.0"
         },
         "httpretty": {
             "hashes": [
@@ -416,13 +418,6 @@
             ],
             "version": "==1.1.0"
         },
-        "jdcal": {
-            "hashes": [
-                "sha256:1abf1305fce18b4e8aa248cf8fe0c56ce2032392bc64bbd61b5dff2a19ec8bba",
-                "sha256:472872e096eb8df219c23f2689fc336668bdb43d194094b5cc1707e1640acfc8"
-            ],
-            "version": "==1.4.1"
-        },
         "jinja2": {
             "hashes": [
                 "sha256:03e47ad063331dd6a3f04a43eddca8a966a26ba0c5b7207a9a9e4e08f1b29419",
@@ -496,11 +491,11 @@
         },
         "markdown": {
             "hashes": [
-                "sha256:5d9f2b5ca24bc4c7a390d22323ca4bad200368612b5aaa7796babf971d2b2f18",
-                "sha256:c109c15b7dc20a9ac454c9e6025927d44460b85bd039da028d85e2b6d0bcc328"
+                "sha256:31b5b491868dcc87d6c24b7e3d19a0d730d59d3e46f4eea6430a321bed387a49",
+                "sha256:96c3ba1261de2f7547b46a00ea8463832c921d3f9d6aba3f255a6f71386db20c"
             ],
             "index": "pypi",
-            "version": "==3.3.3"
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@@ -561,11 +556,11 @@
         },
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@@ -585,32 +580,32 @@
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@@ -630,11 +625,11 @@
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@@ -645,27 +640,25 @@
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@@ -887,11 +880,11 @@
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@@ -941,42 +934,42 @@
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             ],
-            "version": "==1.4.3"
+            "version": "==1.4.5"
         },
         "swagger-ui-bundle": {
             "hashes": [
@@ -1046,11 +1039,11 @@
         },
         "xlsxwriter": {
             "hashes": [
-                "sha256:9b1ade2d1ba5d9b40a6d1de1d55ded4394ab8002718092ae80a08532c2add2e6",
-                "sha256:b807c2d3e379bf6a925f472955beef3e07495c1bac708640696876e68675b49b"
+                "sha256:2b7e22b1268c2ed85d73e5629097c9a63357f2429667ada9863cd05ff8ee33aa",
+                "sha256:30ebc19d0f201fafa34a6c622050ed2a268ac8dee24037a61605caa801dc8af5"
             ],
             "index": "pypi",
-            "version": "==1.3.7"
+            "version": "==1.3.8"
         }
     },
     "develop": {
@@ -1063,58 +1056,61 @@
         },
         "coverage": {
             "hashes": [
-                "sha256:03ed2a641e412e42cc35c244508cf186015c217f0e4d496bf6d7078ebe837ae7",
-                "sha256:04b14e45d6a8e159c9767ae57ecb34563ad93440fc1b26516a89ceb5b33c1ad5",
-                "sha256:0cdde51bfcf6b6bd862ee9be324521ec619b20590787d1655d005c3fb175005f",
-                "sha256:0f48fc7dc82ee14aeaedb986e175a429d24129b7eada1b7e94a864e4f0644dde",
-                "sha256:107d327071061fd4f4a2587d14c389a27e4e5c93c7cba5f1f59987181903902f",
-                "sha256:1375bb8b88cb050a2d4e0da901001347a44302aeadb8ceb4b6e5aa373b8ea68f",
-                "sha256:14a9f1887591684fb59fdba8feef7123a0da2424b0652e1b58dd5b9a7bb1188c",
-                "sha256:16baa799ec09cc0dcb43a10680573269d407c159325972dd7114ee7649e56c66",
-                "sha256:1b811662ecf72eb2d08872731636aee6559cae21862c36f74703be727b45df90",
-                "sha256:1ccae21a076d3d5f471700f6d30eb486da1626c380b23c70ae32ab823e453337",
-                "sha256:2f2cf7a42d4b7654c9a67b9d091ec24374f7c58794858bff632a2039cb15984d",
-                "sha256:322549b880b2d746a7672bf6ff9ed3f895e9c9f108b714e7360292aa5c5d7cf4",
-                "sha256:32ab83016c24c5cf3db2943286b85b0a172dae08c58d0f53875235219b676409",
-                "sha256:3fe50f1cac369b02d34ad904dfe0771acc483f82a1b54c5e93632916ba847b37",
-                "sha256:4a780807e80479f281d47ee4af2eb2df3e4ccf4723484f77da0bb49d027e40a1",
-                "sha256:4a8eb7785bd23565b542b01fb39115a975fefb4a82f23d407503eee2c0106247",
-                "sha256:5bee3970617b3d74759b2d2df2f6a327d372f9732f9ccbf03fa591b5f7581e39",
-                "sha256:60a3307a84ec60578accd35d7f0c71a3a971430ed7eca6567399d2b50ef37b8c",
-                "sha256:6625e52b6f346a283c3d563d1fd8bae8956daafc64bb5bbd2b8f8a07608e3994",
-                "sha256:66a5aae8233d766a877c5ef293ec5ab9520929c2578fd2069308a98b7374ea8c",
-                "sha256:68fb816a5dd901c6aff352ce49e2a0ffadacdf9b6fae282a69e7a16a02dad5fb",
-                "sha256:6b588b5cf51dc0fd1c9e19f622457cc74b7d26fe295432e434525f1c0fae02bc",
-                "sha256:6c4d7165a4e8f41eca6b990c12ee7f44fef3932fac48ca32cecb3a1b2223c21f",
-                "sha256:6d2e262e5e8da6fa56e774fb8e2643417351427604c2b177f8e8c5f75fc928ca",
-                "sha256:6d9c88b787638a451f41f97446a1c9fd416e669b4d9717ae4615bd29de1ac135",
-                "sha256:755c56beeacac6a24c8e1074f89f34f4373abce8b662470d3aa719ae304931f3",
-                "sha256:7e40d3f8eb472c1509b12ac2a7e24158ec352fc8567b77ab02c0db053927e339",
-                "sha256:812eaf4939ef2284d29653bcfee9665f11f013724f07258928f849a2306ea9f9",
-                "sha256:84df004223fd0550d0ea7a37882e5c889f3c6d45535c639ce9802293b39cd5c9",
-                "sha256:859f0add98707b182b4867359e12bde806b82483fb12a9ae868a77880fc3b7af",
-                "sha256:87c4b38288f71acd2106f5d94f575bc2136ea2887fdb5dfe18003c881fa6b370",
-                "sha256:89fc12c6371bf963809abc46cced4a01ca4f99cba17be5e7d416ed7ef1245d19",
-                "sha256:9564ac7eb1652c3701ac691ca72934dd3009997c81266807aef924012df2f4b3",
-                "sha256:9754a5c265f991317de2bac0c70a746efc2b695cf4d49f5d2cddeac36544fb44",
-                "sha256:a565f48c4aae72d1d3d3f8e8fb7218f5609c964e9c6f68604608e5958b9c60c3",
-                "sha256:a636160680c6e526b84f85d304e2f0bb4e94f8284dd765a1911de9a40450b10a",
-                "sha256:a839e25f07e428a87d17d857d9935dd743130e77ff46524abb992b962eb2076c",
-                "sha256:b62046592b44263fa7570f1117d372ae3f310222af1fc1407416f037fb3af21b",
-                "sha256:b7f7421841f8db443855d2854e25914a79a1ff48ae92f70d0a5c2f8907ab98c9",
-                "sha256:ba7ca81b6d60a9f7a0b4b4e175dcc38e8fef4992673d9d6e6879fd6de00dd9b8",
-                "sha256:bb32ca14b4d04e172c541c69eec5f385f9a075b38fb22d765d8b0ce3af3a0c22",
-                "sha256:c0ff1c1b4d13e2240821ef23c1efb1f009207cb3f56e16986f713c2b0e7cd37f",
-                "sha256:c669b440ce46ae3abe9b2d44a913b5fd86bb19eb14a8701e88e3918902ecd345",
-                "sha256:c67734cff78383a1f23ceba3b3239c7deefc62ac2b05fa6a47bcd565771e5880",
-                "sha256:c6809ebcbf6c1049002b9ac09c127ae43929042ec1f1dbd8bb1615f7cd9f70a0",
-                "sha256:cd601187476c6bed26a0398353212684c427e10a903aeafa6da40c63309d438b",
-                "sha256:ebfa374067af240d079ef97b8064478f3bf71038b78b017eb6ec93ede1b6bcec",
-                "sha256:fbb17c0d0822684b7d6c09915677a32319f16ff1115df5ec05bdcaaee40b35f3",
-                "sha256:fff1f3a586246110f34dc762098b5afd2de88de507559e63553d7da643053786"
+                "sha256:004d1880bed2d97151facef49f08e255a20ceb6f9432df75f4eef018fdd5a78c",
+                "sha256:01d84219b5cdbfc8122223b39a954820929497a1cb1422824bb86b07b74594b6",
+                "sha256:040af6c32813fa3eae5305d53f18875bedd079960822ef8ec067a66dd8afcd45",
+                "sha256:06191eb60f8d8a5bc046f3799f8a07a2d7aefb9504b0209aff0b47298333302a",
+                "sha256:13034c4409db851670bc9acd836243aeee299949bd5673e11844befcb0149f03",
+                "sha256:13c4ee887eca0f4c5a247b75398d4114c37882658300e153113dafb1d76de529",
+                "sha256:184a47bbe0aa6400ed2d41d8e9ed868b8205046518c52464fde713ea06e3a74a",
+                "sha256:18ba8bbede96a2c3dde7b868de9dcbd55670690af0988713f0603f037848418a",
+                "sha256:1aa846f56c3d49205c952d8318e76ccc2ae23303351d9270ab220004c580cfe2",
+                "sha256:217658ec7187497e3f3ebd901afdca1af062b42cfe3e0dafea4cced3983739f6",
+                "sha256:24d4a7de75446be83244eabbff746d66b9240ae020ced65d060815fac3423759",
+                "sha256:2910f4d36a6a9b4214bb7038d537f015346f413a975d57ca6b43bf23d6563b53",
+                "sha256:2949cad1c5208b8298d5686d5a85b66aae46d73eec2c3e08c817dd3513e5848a",
+                "sha256:2a3859cb82dcbda1cfd3e6f71c27081d18aa251d20a17d87d26d4cd216fb0af4",
+                "sha256:2cafbbb3af0733db200c9b5f798d18953b1a304d3f86a938367de1567f4b5bff",
+                "sha256:2e0d881ad471768bf6e6c2bf905d183543f10098e3b3640fc029509530091502",
+                "sha256:30c77c1dc9f253283e34c27935fded5015f7d1abe83bc7821680ac444eaf7793",
+                "sha256:3487286bc29a5aa4b93a072e9592f22254291ce96a9fbc5251f566b6b7343cdb",
+                "sha256:372da284cfd642d8e08ef606917846fa2ee350f64994bebfbd3afb0040436905",
+                "sha256:41179b8a845742d1eb60449bdb2992196e211341818565abded11cfa90efb821",
+                "sha256:44d654437b8ddd9eee7d1eaee28b7219bec228520ff809af170488fd2fed3e2b",
+                "sha256:4a7697d8cb0f27399b0e393c0b90f0f1e40c82023ea4d45d22bce7032a5d7b81",
+                "sha256:51cb9476a3987c8967ebab3f0fe144819781fca264f57f89760037a2ea191cb0",
+                "sha256:52596d3d0e8bdf3af43db3e9ba8dcdaac724ba7b5ca3f6358529d56f7a166f8b",
+                "sha256:53194af30d5bad77fcba80e23a1441c71abfb3e01192034f8246e0d8f99528f3",
+                "sha256:5fec2d43a2cc6965edc0bb9e83e1e4b557f76f843a77a2496cbe719583ce8184",
+                "sha256:6c90e11318f0d3c436a42409f2749ee1a115cd8b067d7f14c148f1ce5574d701",
+                "sha256:74d881fc777ebb11c63736622b60cb9e4aee5cace591ce274fb69e582a12a61a",
+                "sha256:7501140f755b725495941b43347ba8a2777407fc7f250d4f5a7d2a1050ba8e82",
+                "sha256:796c9c3c79747146ebd278dbe1e5c5c05dd6b10cc3bcb8389dfdf844f3ead638",
+                "sha256:869a64f53488f40fa5b5b9dcb9e9b2962a66a87dab37790f3fcfb5144b996ef5",
+                "sha256:8963a499849a1fc54b35b1c9f162f4108017b2e6db2c46c1bed93a72262ed083",
+                "sha256:8d0a0725ad7c1a0bcd8d1b437e191107d457e2ec1084b9f190630a4fb1af78e6",
+                "sha256:900fbf7759501bc7807fd6638c947d7a831fc9fdf742dc10f02956ff7220fa90",
+                "sha256:92b017ce34b68a7d67bd6d117e6d443a9bf63a2ecf8567bb3d8c6c7bc5014465",
+                "sha256:970284a88b99673ccb2e4e334cfb38a10aab7cd44f7457564d11898a74b62d0a",
+                "sha256:972c85d205b51e30e59525694670de6a8a89691186012535f9d7dbaa230e42c3",
+                "sha256:9a1ef3b66e38ef8618ce5fdc7bea3d9f45f3624e2a66295eea5e57966c85909e",
+                "sha256:af0e781009aaf59e25c5a678122391cb0f345ac0ec272c7961dc5455e1c40066",
+                "sha256:b6d534e4b2ab35c9f93f46229363e17f63c53ad01330df9f2d6bd1187e5eaacf",
+                "sha256:b7895207b4c843c76a25ab8c1e866261bcfe27bfaa20c192de5190121770672b",
+                "sha256:c0891a6a97b09c1f3e073a890514d5012eb256845c451bd48f7968ef939bf4ae",
+                "sha256:c2723d347ab06e7ddad1a58b2a821218239249a9e4365eaff6649d31180c1669",
+                "sha256:d1f8bf7b90ba55699b3a5e44930e93ff0189aa27186e96071fac7dd0d06a1873",
+                "sha256:d1f9ce122f83b2305592c11d64f181b87153fc2c2bbd3bb4a3dde8303cfb1a6b",
+                "sha256:d314ed732c25d29775e84a960c3c60808b682c08d86602ec2c3008e1202e3bb6",
+                "sha256:d636598c8305e1f90b439dbf4f66437de4a5e3c31fdf47ad29542478c8508bbb",
+                "sha256:deee1077aae10d8fa88cb02c845cfba9b62c55e1183f52f6ae6a2df6a2187160",
+                "sha256:ebe78fe9a0e874362175b02371bdfbee64d8edc42a044253ddf4ee7d3c15212c",
+                "sha256:f030f8873312a16414c0d8e1a1ddff2d3235655a2174e3648b4fa66b3f2f1079",
+                "sha256:f0b278ce10936db1a37e6954e15a3730bea96a0997c26d7fee88e6c396c2086d",
+                "sha256:f11642dddbb0253cc8853254301b51390ba0081750a8ac03f20ea8103f0c56b6"
             ],
             "index": "pypi",
-            "version": "==5.4"
+            "version": "==5.5"
         },
         "iniconfig": {
             "hashes": [
diff --git a/crc/api.yml b/crc/api.yml
index 833efd54..6dc1afa6 100644
--- a/crc/api.yml
+++ b/crc/api.yml
@@ -65,7 +65,8 @@ paths:
             application/json:
               schema:
                 type: array
-                $ref: "#/components/schemas/User"
+                items:
+                  $ref: "#/components/schemas/User"
   # /v1.0/study
   /study:
     get:
@@ -80,7 +81,8 @@ paths:
             application/json:
               schema:
                 type: array
-                $ref: "#/components/schemas/Study"
+                items:
+                  $ref: "#/components/schemas/Study"
     post:
       operationId: crc.api.study.add_study
       summary: Creates a new study with the given parameters.
@@ -159,6 +161,7 @@ paths:
   /workflow_sync/{workflow_spec_id}/spec:
     parameters:
       - name: workflow_spec_id
+        required: true
         in: path
         description: The unique id of an existing workflow specification to modify.
         schema:
@@ -392,7 +395,7 @@ paths:
     parameters:
       - name: spec_id
         in: path
-        required: false
+        required: true
         description: The unique id of an existing workflow specification to modify.
         schema:
           type: string
@@ -441,7 +444,7 @@ paths:
     parameters:
       - name: spec_id
         in: path
-        required: false
+        required: true
         description: The unique id of an existing workflow specification to validate.
         schema:
           type: string
@@ -497,7 +500,7 @@ paths:
     parameters:
       - name: cat_id
         in: path
-        required: false
+        required: true
         description: The unique id of an existing workflow spec category to modify.
         schema:
           type: string
@@ -1513,8 +1516,7 @@ components:
           example: "random_fact"
           x-nullable: true
         file:
-          type: file
-          format: binary
+          type: string 
     Workflow:
       properties:
         id:
@@ -1522,7 +1524,7 @@ components:
           type: integer
           format: int64
         status:
-          type: enum
+          type: string
           enum: ['new','user_input_required','waiting','complete']
         navigation:
           type: array
@@ -1576,7 +1578,7 @@ components:
         data:
           type: object
         multi_instance_type:
-          type: enum
+          type: string
           enum: ['none', 'looping', 'parallel', 'sequential']
         multi_instance_count:
           type: number
@@ -1709,7 +1711,7 @@ components:
           type: string
           readOnly: true
         type:
-          type: enum
+          type: string
           enum: ['string', 'long', 'boolean', 'date', 'enum']
           readOnly: true
         label:
@@ -1785,7 +1787,7 @@ components:
           type: string
           example: "Chuck Norris"
         data:
-          type: any
+          type: string
     NavigationItem:
       properties:
         id:
@@ -1815,7 +1817,7 @@ components:
           type: integer
           example: 4
         state:
-          type: enum
+          type: string
           enum: ['FUTURE', 'WAITING', 'READY', 'CANCELLED', 'COMPLETED','LIKELY','MAYBE']
           readOnly: true
         is_decision:
diff --git a/tests/base_test.py b/tests/base_test.py
index 46a68422..a9fcfce1 100644
--- a/tests/base_test.py
+++ b/tests/base_test.py
@@ -166,8 +166,10 @@ class BaseTest(unittest.TestCase):
             study_model = StudyModel(**study_json)
             session.add(study_model)
             StudyService._add_all_workflow_specs_to_study(study_model)
-            session.execute(Sequence(StudyModel.__tablename__ + '_id_seq'))
-        session.commit()
+            session.commit()
+            update_seq = f"ALTER SEQUENCE %s RESTART WITH %s" % (StudyModel.__tablename__ + '_id_seq', study_model.id + 1)
+            print("Update Sequence." + update_seq)
+            session.execute(update_seq)
         session.flush()
 
         specs = session.query(WorkflowSpecModel).all()
diff --git a/tests/workflow/test_workflow_processor.py b/tests/workflow/test_workflow_processor.py
index 1d1813ed..879882c4 100644
--- a/tests/workflow/test_workflow_processor.py
+++ b/tests/workflow/test_workflow_processor.py
@@ -253,10 +253,8 @@ class TestWorkflowProcessor(BaseTest):
         processor = self.get_processor(study, workflow_spec_model)
         self.assertTrue(processor.get_version_string().startswith('v2.1.1'))
 
-
     def test_hard_reset(self):
         self.load_example_data()
-
         # Start the two_forms workflow, and enter some data in the first form.
         study = session.query(StudyModel).first()
         workflow_spec_model = self.load_test_spec("two_forms")
@@ -275,6 +273,8 @@ class TestWorkflowProcessor(BaseTest):
 
         # Assure that creating a new processor doesn't cause any issues, and maintains the spec version.
         processor.workflow_model.bpmn_workflow_json = processor.serialize()
+        db.session.add(processor.workflow_model)  ## Assure this isn't transient, which was causing some errors.
+        self.assertIsNotNone(processor.workflow_model.bpmn_workflow_json)
         processor2 = WorkflowProcessor(processor.workflow_model)
         self.assertFalse(processor2.is_latest_spec) # Still at version 1.
 

From dcb4e7b736003a06d44cbb864e1e2d52b3f0c322 Mon Sep 17 00:00:00 2001
From: Dan <daniel.h.funk@gmail.com>
Date: Fri, 2 Apr 2021 17:58:27 -0400
Subject: [PATCH 09/11] fixing an error by taking a bit of the magic out of one
 of Mike's regex hinting tools.  I figure the hint is still good, and a little
 less bittle, and all the information is already there if people need to dig.

---
 crc/services/error_service.py                  | 8 ++++----
 tests/workflow/test_workflow_customer_error.py | 3 ++-
 2 files changed, 6 insertions(+), 5 deletions(-)

diff --git a/crc/services/error_service.py b/crc/services/error_service.py
index 2d66f0eb..3df9db64 100644
--- a/crc/services/error_service.py
+++ b/crc/services/error_service.py
@@ -17,10 +17,10 @@ generic_message = """Workflow validation failed. For more information about the
 known_errors = {'Error is Non-default exclusive outgoing sequence flow  without condition':
                 {'hint': 'Add a Condition Type to your gateway path.'},
 
-                'Could not set task title on task (\w+) with \'(.*)\' property because \\1: Error evaluating '
-                'expression \'(.*)\', $':
-                {'hint': 'You are overriding the title for task `{task_id}`, using the `{property}` extension, and it is causing an error.  Look under the extensions tab for the task, and check the value you are setting for the property.',
-                 'groups': {'task_id': 0, 'property': 1}}}
+                'Could not set task title on task .*':
+                {'hint': 'You are overriding the title using an extension and it is causing this error. '
+                         'Look under the extensions tab for the task, and check the value you are setting '
+                         'for the property.'}}
 
 
 class ValidationErrorService(object):
diff --git a/tests/workflow/test_workflow_customer_error.py b/tests/workflow/test_workflow_customer_error.py
index 646e38e3..e58a4a59 100644
--- a/tests/workflow/test_workflow_customer_error.py
+++ b/tests/workflow/test_workflow_customer_error.py
@@ -22,5 +22,6 @@ class TestCustomerError(BaseTest):
         rv = self.app.get('/v1.0/workflow-specification/%s/validate' % spec_model.id, headers=self.logged_in_headers())
         self.assertIn('hint', rv.json[0])
         json_data = json.loads(rv.get_data(as_text=True))
-        self.assertEqual('You are overriding the title for task `Task_0xbnd5d`, using the `display_name` extension, and it is causing an error.  Look under the extensions tab for the task, and check the value you are setting for the property.',
+        self.assertEqual("You are overriding the title using an extension and it is causing this error. Look under the "
+                         "extensions tab for the task, and check the value you are setting for the property.",
                          json_data[0]['hint'])

From 9dca220089c090fa98cf07c1c9a3e8229a51ee70 Mon Sep 17 00:00:00 2001
From: Dan <daniel.h.funk@gmail.com>
Date: Fri, 2 Apr 2021 17:58:43 -0400
Subject: [PATCH 10/11] updating package.lock

---
 postgres/package-lock.json | 3 +++
 1 file changed, 3 insertions(+)
 create mode 100644 postgres/package-lock.json

diff --git a/postgres/package-lock.json b/postgres/package-lock.json
new file mode 100644
index 00000000..48e341a0
--- /dev/null
+++ b/postgres/package-lock.json
@@ -0,0 +1,3 @@
+{
+  "lockfileVersion": 1
+}

From 9f66a938f2267cff7b183b02c271476794dd526a Mon Sep 17 00:00:00 2001
From: Kelly McDonald <kelly@fammcdonald.net>
Date: Mon, 5 Apr 2021 10:19:29 -0400
Subject: [PATCH 11/11] Update pip

---
 Pipfile      |   1 -
 Pipfile.lock | 172 +++++++++++++++++++++++++++++++++++++++++++++++----
 2 files changed, 159 insertions(+), 14 deletions(-)

diff --git a/Pipfile b/Pipfile
index d6bed100..1b8a41c0 100644
--- a/Pipfile
+++ b/Pipfile
@@ -45,7 +45,6 @@ werkzeug = "*"
 xlrd = "*"
 xlsxwriter = "*"
 pygithub = "*"
-python-box = "*"
 python-levenshtein = "*"
 
 
diff --git a/Pipfile.lock b/Pipfile.lock
index 0776d7c5..eabcf48a 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -1,7 +1,7 @@
 {
     "_meta": {
         "hash": {
-            "sha256": "621d57ec513f24c665dd34e08ae5a19fc27784e87c55bb4d2a91a1d48a473081"
+            "sha256": "ac8021b2a0adfb019c4bc714c5e9a6c11cc0f2cbd0725228aaf2b8bd71603646"
         },
         "pipfile-spec": 6,
         "requires": {
@@ -31,6 +31,14 @@
             "index": "pypi",
             "version": "==1.5.8"
         },
+        "amqp": {
+            "hashes": [
+                "sha256:03e16e94f2b34c31f8bf1206d8ddd3ccaa4c315f7f6a1879b7b1210d229568c2",
+                "sha256:493a2ac6788ce270a2f6a765b017299f60c1998f5a8617908ee9be082f7300fb"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==5.0.6"
+        },
         "aniso8601": {
             "hashes": [
                 "sha256:1d2b7ef82963909e93c4f24ce48d4de9e66009a21bf1c1e1c85bdd0812fe412f",
@@ -43,6 +51,7 @@
                 "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
                 "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.3.0"
         },
         "babel": {
@@ -50,6 +59,7 @@
                 "sha256:9d35c22fcc79893c3ecc85ac4a56cde1ecf3f19c540bba0922308a6c06ca6fa5",
                 "sha256:da031ab54472314f210b0adcff1588ee5d1d1d0ba4dbd07b94dba82bde791e05"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.9.0"
         },
         "bcrypt": {
@@ -62,6 +72,7 @@
                 "sha256:cd1ea2ff3038509ea95f687256c46b79f5fc382ad0aa3664d200047546d511d1",
                 "sha256:cdcdcb3972027f83fe24a48b1e90ea4b584d35f1cc279d76de6fc4b13376239d"
             ],
+            "markers": "python_version >= '3.6'",
             "version": "==3.2.0"
         },
         "beautifulsoup4": {
@@ -72,12 +83,27 @@
             ],
             "version": "==4.9.3"
         },
+        "billiard": {
+            "hashes": [
+                "sha256:299de5a8da28a783d51b197d496bef4f1595dd023a93a4f59dde1886ae905547",
+                "sha256:87103ea78fa6ab4d5c751c4909bcff74617d985de7fa8b672cf8618afd5a875b"
+            ],
+            "version": "==3.6.4.0"
+        },
         "blinker": {
             "hashes": [
                 "sha256:471aee25f3992bd325afa3772f1063dbdbbca947a041b8b89466dc00d606f8b6"
             ],
             "version": "==1.4"
         },
+        "celery": {
+            "hashes": [
+                "sha256:5e8d364e058554e83bbb116e8377d90c79be254785f357cb2cec026e79febe13",
+                "sha256:f4efebe6f8629b0da2b8e529424de376494f5b7a743c321c8a2ddc2b1414921c"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==5.0.5"
+        },
         "certifi": {
             "hashes": [
                 "sha256:1a4995114262bffbc2413b159f2a1a480c969de6e6eb13ee966d470af86af59c",
@@ -132,6 +158,7 @@
                 "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa",
                 "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==4.0.0"
         },
         "click": {
@@ -139,8 +166,29 @@
                 "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a",
                 "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==7.1.2"
         },
+        "click-didyoumean": {
+            "hashes": [
+                "sha256:112229485c9704ff51362fe34b2d4f0b12fc71cc20f6d2b3afabed4b8bfa6aeb"
+            ],
+            "version": "==0.0.3"
+        },
+        "click-plugins": {
+            "hashes": [
+                "sha256:46ab999744a9d831159c3411bb0c79346d94a444df9a3a3742e9ed63645f264b",
+                "sha256:5d262006d3222f5057fd81e1623d4443e41dcda5dc815c06b442aa3c02889fc8"
+            ],
+            "version": "==1.1.1"
+        },
+        "click-repl": {
+            "hashes": [
+                "sha256:9c4c3d022789cae912aad8a3f5e1d7c2cdd016ee1225b5212ad3e8691563cda5",
+                "sha256:b9f29d52abc4d6059f8e276132a111ab8d94980afe6a5432b9d996544afa95d5"
+            ],
+            "version": "==0.1.6"
+        },
         "clickclick": {
             "hashes": [
                 "sha256:4efb13e62353e34c5eef7ed6582c4920b418d7dedc86d819e22ee089ba01802c",
@@ -155,6 +203,14 @@
             ],
             "version": "==0.9.1"
         },
+        "configparser": {
+            "hashes": [
+                "sha256:85d5de102cfe6d14a5172676f09d19c465ce63d6019cf0a4ef13385fc535e828",
+                "sha256:af59f2cdd7efbdd5d111c1976ecd0b82db9066653362f0962d7bf1d3ab89a1fa"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==5.0.2"
+        },
         "connexion": {
             "extras": [
                 "swagger-ui"
@@ -229,14 +285,16 @@
                 "sha256:08452d69b6b5bc66e8330adde0a4f8642e969b9e1702904d137eeb29c8ffc771",
                 "sha256:6d2de2de7931a968874481ef30208fd4e08da39177d61d3d4ebdf4366e7dbca1"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.2.12"
         },
         "docutils": {
             "hashes": [
-                "sha256:0c5b78adfbf7762415433f5515cd5c9e762339e23369dbe8000d84a4bf4ab3af",
-                "sha256:c2de3a60e9e7d07be26b7f2b00ca0309c207e06c100f9cc2a94931fc75a478fc"
+                "sha256:a71042bb7207c03d5647f280427f14bfbd1a65c9eb84f4b341d85fafb6bb4bdf",
+                "sha256:e2ffeea817964356ba4470efba7c2f42b6b0de0b04e66378507e3e2504bbff4c"
             ],
-            "version": "==0.16"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==0.17"
         },
         "docxtpl": {
             "hashes": [
@@ -318,8 +376,16 @@
                 "sha256:2bda44b43e7cacb15d4e05ff3cc1f8bc97936cc464623424102bfc2c35e95912",
                 "sha256:f12c3d4cc5cc7fdcc148b9527ea05671718c3ea45d50c7e732cceb33f574b390"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.5.1"
         },
+        "future": {
+            "hashes": [
+                "sha256:b1bead90b70cf6ec3f0710ae53a525360fa360d306a86583adc6bf83a4db537d"
+            ],
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
+            "version": "==0.18.2"
+        },
         "greenlet": {
             "hashes": [
                 "sha256:0a77691f0080c9da8dfc81e23f4e3cffa5accf0f5b56478951016d7cfead9196",
@@ -388,6 +454,7 @@
                 "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
                 "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.10"
         },
         "imagesize": {
@@ -395,6 +462,7 @@
                 "sha256:6965f19a6a2039c7d48bca7dba2473069ff854c36ae6f19d2cde309d998228a1",
                 "sha256:b1f6b5a4eab1f73479a50fb79fcf729514a900c341d8503d62a62dbc4127a2b1"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.2.0"
         },
         "inflection": {
@@ -402,6 +470,7 @@
                 "sha256:1a29730d366e996aaacffb2f1f1cb9593dc38e2ddd30c91250c6dde09ea9b417",
                 "sha256:f38b2b640938a4f35ade69ac3d053042959b62a0f1076a5bbaa1b9526605a8a2"
             ],
+            "markers": "python_version >= '3.5'",
             "version": "==0.5.1"
         },
         "isodate": {
@@ -416,6 +485,7 @@
                 "sha256:321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19",
                 "sha256:b12271b2047cb23eeb98c8b5622e2e5c5e9abd9784a153e9d8ef9cb4dd09d749"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.1.0"
         },
         "jinja2": {
@@ -423,6 +493,7 @@
                 "sha256:03e47ad063331dd6a3f04a43eddca8a966a26ba0c5b7207a9a9e4e08f1b29419",
                 "sha256:a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==2.11.3"
         },
         "jsonschema": {
@@ -432,10 +503,21 @@
             ],
             "version": "==3.2.0"
         },
+        "kombu": {
+            "hashes": [
+                "sha256:6dc509178ac4269b0e66ab4881f70a2035c33d3a622e20585f965986a5182006",
+                "sha256:f4965fba0a4718d47d470beeb5d6446e3357a62402b16c510b6a2f251e05ac3c"
+            ],
+            "markers": "python_version >= '3.6'",
+            "version": "==5.0.2"
+        },
         "ldap3": {
             "hashes": [
                 "sha256:18c3ee656a6775b9b0d60f7c6c5b094d878d1d90fc03d56731039f0a4b546a91",
-                "sha256:c1df41d89459be6f304e0ceec4b00fdea533dbbcd83c802b1272dcdb94620b57"
+                "sha256:afc6fc0d01f02af82cd7bfabd3bbfd5dc96a6ae91e97db0a2dab8a0f1b436056",
+                "sha256:c1df41d89459be6f304e0ceec4b00fdea533dbbcd83c802b1272dcdb94620b57",
+                "sha256:8c949edbad2be8a03e719ba48bd6779f327ec156929562814b3e84ab56889c8c",
+                "sha256:4139c91f0eef9782df7b77c8cbc6243086affcb6a8a249b768a9658438e5da59"
             ],
             "index": "pypi",
             "version": "==2.9"
@@ -487,6 +569,7 @@
                 "sha256:17831f0b7087c313c0ffae2bcbbd3c1d5ba9eeac9c38f2eb7b50e8c99fe9d5ab",
                 "sha256:aea166356da44b9b830c8023cd9b557fa856bd8b4035d6de771ca027dfc5cc6e"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.1.4"
         },
         "markdown": {
@@ -552,6 +635,7 @@
                 "sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be",
                 "sha256:feb7b34d6325451ef96bc0e36e1a6c0c1c64bc1fbec4b854f4529e51887b1621"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==1.1.1"
         },
         "marshmallow": {
@@ -605,6 +689,7 @@
                 "sha256:e9459f40244bb02b2f14f6af0cd0732791d72232bbb0dc4bab57ef88e75f6935",
                 "sha256:edb1f041a9146dcf02cd7df7187db46ab524b9af2515f392f337c7cbbf5b52cd"
             ],
+            "markers": "python_version >= '3.7'",
             "version": "==1.20.2"
         },
         "openapi-schema-validator": {
@@ -613,6 +698,7 @@
                 "sha256:a4b2712020284cee880b4c55faa513fbc2f8f07f365deda6098f8ab943c9f0df",
                 "sha256:b65d6c2242620bfe76d4c749b61cd9657e4528895a8f4fb6f916085b508ebd24"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==0.1.5"
         },
         "openapi-spec-validator": {
@@ -621,6 +707,7 @@
                 "sha256:53ba3d884e98ff2062d5ada025aa590541dcd665b8f81067dc82dd61c0923759",
                 "sha256:e11df7c559339027bd04f2399bc82474983129a6a7a6a0421eaa95e2c844d686"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
             "version": "==0.3.0"
         },
         "openpyxl": {
@@ -636,6 +723,7 @@
                 "sha256:5b327ac1320dc863dca72f4514ecc086f31186744b84a230374cc1fd776feae5",
                 "sha256:67714da7f7bc052e064859c05c595155bd1ee9f69f76557e21f051443c20947a"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==20.9"
         },
         "pandas": {
@@ -660,6 +748,14 @@
             "index": "pypi",
             "version": "==1.2.3"
         },
+        "prompt-toolkit": {
+            "hashes": [
+                "sha256:bf00f22079f5fadc949f42ae8ff7f05702826a97059ffcc6281036ad40ac6f04",
+                "sha256:e1b4f11b9336a28fa11810bc623c357420f69dfdb6d2dac41ca2c21a55c033bc"
+            ],
+            "markers": "python_full_version >= '3.6.1'",
+            "version": "==3.0.18"
+        },
         "psycopg2-binary": {
             "hashes": [
                 "sha256:0deac2af1a587ae12836aa07970f5cb91964f05a7c6cdb69d8425ff4c15d4e2c",
@@ -703,8 +799,19 @@
         },
         "pyasn1": {
             "hashes": [
+                "sha256:e89bf84b5437b532b0803ba5c9a5e054d21fec423a89952a74f87fa2c9b7bce2",
+                "sha256:0458773cfe65b153891ac249bcf1b5f8f320b7c2ce462151f8fa74de8934becf",
+                "sha256:99fcc3c8d804d1bc6d9a099921e39d827026409a58f2a720dcdb89374ea0c776",
+                "sha256:aef77c9fb94a3ac588e87841208bdec464471d9871bd5050a287cc9a475cd0ba",
+                "sha256:08c3c53b75eaa48d71cf8c710312316392ed40899cb34710d092e96745a358b7",
                 "sha256:39c7e2ec30515947ff4e87fb6f456dfc6e84857d34be479c9d4a4ba4bf46aa5d",
-                "sha256:aef77c9fb94a3ac588e87841208bdec464471d9871bd5050a287cc9a475cd0ba"
+                "sha256:78fa6da68ed2727915c4767bb386ab32cdba863caa7dbe473eaae45f9959da86",
+                "sha256:014c0e9976956a08139dc0712ae195324a75e142284d5f87f1a87ee1b068a359",
+                "sha256:03840c999ba71680a131cfaee6fab142e1ed9bbd9c693e285cc6aca0d555e576",
+                "sha256:5c9414dcfede6e441f7e8f81b43b34e834731003427e5b09e4e00e3172a10f00",
+                "sha256:7ab8a544af125fb704feadb008c99a88805126fb525280b2270bb25cc1d78a12",
+                "sha256:fec3e9d8e36808a28efb59b489e4528c10ad0f480e57dcc32b4de5c9d8c9fdf3",
+                "sha256:6e7545f1a61025a4e58bb336952c5061697da694db1cae97b116e9c46abcf7c8"
             ],
             "version": "==0.4.8"
         },
@@ -713,6 +820,7 @@
                 "sha256:2d475327684562c3a96cc71adf7dc8c4f0565175cf86b6d7a404ff4c771f15f0",
                 "sha256:7582ad22678f0fcd81102833f60ef8d0e57288b6b5fb00323d101be910e35705"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.20"
         },
         "pygithub": {
@@ -728,6 +836,7 @@
                 "sha256:2656e1a6edcdabf4275f9a3640db59fd5de107d88e8663c5d4e9a0fa62f77f94",
                 "sha256:534ef71d539ae97d4c3a4cf7d6f110f214b0e687e92f9cb9d2a3b0d3101289c8"
             ],
+            "markers": "python_version >= '3.5'",
             "version": "==2.8.1"
         },
         "pyjwt": {
@@ -743,12 +852,14 @@
                 "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1",
                 "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"
             ],
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
             "version": "==2.4.7"
         },
         "pyrsistent": {
             "hashes": [
                 "sha256:2e636185d9eb976a18a8a8e96efce62f2905fea90041958d8cc2a189756ebf3e"
             ],
+            "markers": "python_version >= '3.5'",
             "version": "==0.17.3"
         },
         "python-box": {
@@ -756,7 +867,7 @@
                 "sha256:4ed4ef5d34de505a65c01e3f1911de8cdb29484fcae0c035141dce535c6c194a",
                 "sha256:f2a531f9f5bbef078c175fad6abb31e9b59d40d121ea79993197e6bb221c6be6"
             ],
-            "index": "pypi",
+            "markers": "python_version >= '3.6'",
             "version": "==5.3.0"
         },
         "python-dateutil": {
@@ -776,8 +887,10 @@
         "python-editor": {
             "hashes": [
                 "sha256:1bf6e860a8ad52a14c3ee1252d5dc25b2030618ed80c022598f00176adc8367d",
-                "sha256:51fda6bcc5ddbbb7063b2af7509e43bd84bfc32a4ff71349ec7847713882327b",
-                "sha256:5f98b069316ea1c2ed3f67e7f5df6c0d8f10b689964a4a811ff64f0106819ec8"
+                "sha256:ea87e17f6ec459e780e4221f295411462e0d0810858e055fc514684350a2f522",
+                "sha256:c3da2053dbab6b29c94e43c486ff67206eafbe7eb52dbec7390b5e2fb05aac77",
+                "sha256:5f98b069316ea1c2ed3f67e7f5df6c0d8f10b689964a4a811ff64f0106819ec8",
+                "sha256:51fda6bcc5ddbbb7063b2af7509e43bd84bfc32a4ff71349ec7847713882327b"
             ],
             "version": "==1.0.4"
         },
@@ -827,6 +940,7 @@
                 "sha256:fdc842473cd33f45ff6bce46aea678a54e3d21f1b61a7750ce3c498eedfe25d6",
                 "sha256:fe69978f3f768926cfa37b867e3843918e012cf83f680806599ddce33c2c68b0"
             ],
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5'",
             "version": "==5.4.1"
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@@ -969,6 +1090,7 @@
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