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cr-connect-workflow/crc/api/document.py

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Refactoring Reference files to use the lookup table, rather than parsing the results directly out of the spreadsheet, or attempting to cache them. Adding a DocumentService to clean up the FileService, and get Documents well seperated, as it seems likely be pulled out or seperated in the future, there is now a Documents api file as well, for the same reason. Some other minor changes are just fixing white space to assure our code is linting correctly. I removed _create_study_workflow_approvals from the base test, as we don't use approvals like this anymore.
2021-07-06 13:10:20 -04:00
from crc.models.api_models import DocumentDirectorySchema
from crc.models.file import File
from crc.services.document_service import DocumentService
from crc.services.lookup_service import LookupService
1. Created a UserFileService, so it's clear what we use when for File Services, UserFiles, SpecFiles, and ReferenceFiles each function differently. 2. Reference Files and Spec Files are written to disk, they do not exist in the database at all.
2022-02-02 12:59:56 -05:00
from crc.services.user_file_service import UserFileService
Refactoring Reference files to use the lookup table, rather than parsing the results directly out of the spreadsheet, or attempting to cache them. Adding a DocumentService to clean up the FileService, and get Documents well seperated, as it seems likely be pulled out or seperated in the future, there is now a Documents api file as well, for the same reason. Some other minor changes are just fixing white space to assure our code is linting correctly. I removed _create_study_workflow_approvals from the base test, as we don't use approvals like this anymore.
2021-07-06 13:10:20 -04:00
def get_document_directory(study_id, workflow_id=None):
"""
return a nested list of files arranged according to the category hierarchy
defined in the doc dictionary
"""
1. Created a UserFileService, so it's clear what we use when for File Services, UserFiles, SpecFiles, and ReferenceFiles each function differently. 2. Reference Files and Spec Files are written to disk, they do not exist in the database at all.
2022-02-02 12:59:56 -05:00
file_models = UserFileService.get_files_for_study(study_id=study_id)
Refactoring Reference files to use the lookup table, rather than parsing the results directly out of the spreadsheet, or attempting to cache them. Adding a DocumentService to clean up the FileService, and get Documents well seperated, as it seems likely be pulled out or seperated in the future, there is now a Documents api file as well, for the same reason. Some other minor changes are just fixing white space to assure our code is linting correctly. I removed _create_study_workflow_approvals from the base test, as we don't use approvals like this anymore.
2021-07-06 13:10:20 -04:00
doc_dict = DocumentService.get_dictionary()
document => file file_refactor => file
2022-04-20 10:39:19 -04:00
files = (File.from_file_model(model, doc_dict) for model in file_models)
Refactoring Reference files to use the lookup table, rather than parsing the results directly out of the spreadsheet, or attempting to cache them. Adding a DocumentService to clean up the FileService, and get Documents well seperated, as it seems likely be pulled out or seperated in the future, there is now a Documents api file as well, for the same reason. Some other minor changes are just fixing white space to assure our code is linting correctly. I removed _create_study_workflow_approvals from the base test, as we don't use approvals like this anymore.
2021-07-06 13:10:20 -04:00
directory = DocumentService.get_directory(doc_dict, files, workflow_id)
return DocumentDirectorySchema(many=True).dump(directory)
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