cr-connect-workflow/tests/test_api.py

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import json
import unittest
from crc import db
from crc.models import StudyModel, StudySchema, WorkflowSpecModel, WorkflowSpecSchema
from tests.base_test import BaseTest
class TestStudy(BaseTest, unittest.TestCase):
def test_study_basics(self):
self.load_example_data()
study = db.session.query(StudyModel).first()
self.assertIsNotNone(study)
def test_study_api_get_single_study(self):
self.load_example_data()
study = db.session.query(StudyModel).first()
rv = self.app.get('/v1.0/study/%i' % study.id,
follow_redirects=True,
content_type="application/json")
self.assert_success(rv)
json_data = json.loads(rv.get_data(as_text=True))
study2 = StudySchema().load(json_data, session=db.session)
self.assertEqual(study, study2)
self.assertEqual(study.id, study2.id)
self.assertEqual(study.title, study2.title)
self.assertEqual(study.last_updated, study2.last_updated)
self.assertEqual(study.protocol_builder_status, study2.protocol_builder_status)
self.assertEqual(study.primary_investigator_id, study2.primary_investigator_id)
self.assertEqual(study.sponsor, study2.sponsor)
self.assertEqual(study.ind_number, study2.ind_number)
def test_list_workflow_specifications(self):
self.load_example_data()
spec = db.session.query(WorkflowSpecModel).first()
rv = self.app.get('/v1.0/workflow-specification',
follow_redirects=True,
content_type="application/json")
self.assert_success(rv)
json_data = json.loads(rv.get_data(as_text=True))
specs = WorkflowSpecSchema(many=True).load(json_data, session=db.session)
spec2 = specs[0]
self.assertEqual(spec.id, spec2.id)
self.assertEqual(spec.display_name, spec2.display_name)
self.assertEqual(spec.description, spec2.description)
def test_add_workflow_to_study(self):
self.load_example_data()
study = db.session.query(StudyModel).first()
spec = db.session.query(WorkflowSpecModel).first()
rv = self.app.post('/v1.0/study/%i/workflows' % study.id, data=WorkflowSpecSchema().dump(spec))
self.assert_success(rv)