cr-connect-workflow/tests/test_multi_instance_tasks_a...

112 lines
4.7 KiB
Python
Raw Normal View History

import json
import random
from unittest.mock import patch
from tests.base_test import BaseTest
from crc import session, app
from crc.models.api_models import WorkflowApiSchema, MultiInstanceType
from crc.models.workflow import WorkflowStatus
from example_data import ExampleDataLoader
class TestMultiinstanceTasksApi(BaseTest):
@patch('crc.services.protocol_builder.requests.get')
def test_multi_instance_task(self, mock_get):
ExampleDataLoader().load_reference_documents()
# Enable the protocol builder.
app.config['PB_ENABLED'] = True
# This depends on getting a list of investigators back from the protocol builder.
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('investigators.json')
workflow = self.create_workflow('multi_instance')
# get the first form in the two form workflow.
workflow = self.get_workflow_api(workflow)
navigation = self.get_workflow_api(workflow).navigation
self.assertEqual(5, len(navigation)) # Start task, form_task, multi_task, end task
self.assertEqual("UserTask", workflow.next_task.type)
self.assertEqual(MultiInstanceType.sequential.value, workflow.next_task.multi_instance_type)
self.assertEqual(5, workflow.next_task.multi_instance_count)
# Assure that the names for each task are properly updated, so they aren't all the same.
self.assertEqual("Primary Investigator", workflow.next_task.title)
@patch('crc.services.protocol_builder.requests.get')
def test_parallel_multi_instance(self, mock_get):
# Assure we get nine investigators back from the API Call, as set in the investigators.json file.
app.config['PB_ENABLED'] = True
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('investigators.json')
ExampleDataLoader().load_reference_documents()
workflow = self.create_workflow('multi_instance_parallel')
workflow_api = self.get_workflow_api(workflow)
self.assertEqual(9, len(workflow_api.navigation))
ready_items = [nav for nav in workflow_api.navigation if nav.state == "READY"]
self.assertEqual(5, len(ready_items))
self.assertEqual("UserTask", workflow_api.next_task.type)
self.assertEqual("MultiInstanceTask",workflow_api.next_task.name)
self.assertEqual("Primary Investigator", workflow_api.next_task.title)
for i in random.sample(range(5), 5):
task_id = ready_items[i].task_id
rv = self.app.put('/v1.0/workflow/%i/task/%s/set_token' % (workflow.id, task_id),
headers=self.logged_in_headers(),
content_type="application/json")
self.assert_success(rv)
json_data = json.loads(rv.get_data(as_text=True))
workflow_api = WorkflowApiSchema().load(json_data)
data = workflow_api.next_task.data
data['investigator']['email'] = "dhf8r@virginia.edu"
self.complete_form(workflow, workflow_api.next_task, data)
#tasks = self.get_workflow_api(workflow).user_tasks
workflow_api = self.get_workflow_api(workflow)
self.assertEqual(WorkflowStatus.complete, workflow_api.status)
@patch('crc.services.protocol_builder.requests.get')
def test_parallel_multi_instance_update_all(self, mock_get):
# Assure we get nine investigators back from the API Call, as set in the investigators.json file.
app.config['PB_ENABLED'] = True
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('investigators.json')
ExampleDataLoader().load_reference_documents()
workflow = self.create_workflow('multi_instance_parallel')
workflow_api = self.get_workflow_api(workflow)
self.assertEqual(9, len(workflow_api.navigation))
ready_items = [nav for nav in workflow_api.navigation if nav.state == "READY"]
self.assertEqual(5, len(ready_items))
self.assertEqual("UserTask", workflow_api.next_task.type)
self.assertEqual("MultiInstanceTask",workflow_api.next_task.name)
self.assertEqual("Primary Investigator", workflow_api.next_task.title)
data = workflow_api.next_task.data
data['investigator']['email'] = "dhf8r@virginia.edu"
self.complete_form(workflow, workflow_api.next_task, data, update_all=True)
workflow = self.get_workflow_api(workflow)
self.assertEqual(WorkflowStatus.complete, workflow.status)
data = workflow.next_task.data
for key in data["StudyInfo"]["investigators"]:
2021-08-16 14:18:29 +00:00
self.assertEqual("dhf8r@virginia.edu", data["StudyInfo"]["investigators"][key]['email'])