49 lines
1.9 KiB
Python
49 lines
1.9 KiB
Python
|
import requests
|
||
|
|
|
||
|
|
from crc.scripts.script import Script, DataStoreBase
|
||
|
|
from crc import session
|
||
|
|
from crc.models.workflow import WorkflowModel
|
||
|
|
from crc.models.data_store import DataStoreModel
|
||
|
|
|
||
|
|
class StudyDataSet(Script,DataStoreBase):
|
||
|
|
def get_description(self):
|
||
|
|
return """Sets study data from the data store."""
|
||
|
|
|
||
|
|
|
||
|
|
def do_task_validate_only(self, task, study_id, workflow_id, *args, **kwargs):
|
||
|
|
self.check_args(args)
|
||
|
|
workflow = session.query(WorkflowModel).filter(WorkflowModel.id == workflow_id).first()
|
||
|
|
self.get_prev_value(study_id,args[0])
|
||
|
|
|
||
|
|
|
||
|
|
def do_task(self, task, study_id, workflow_id, *args, **kwargs):
|
||
|
|
self.check_args(args)
|
||
|
|
study = self.get_prev_value(study_id,args[0])
|
||
|
|
workflow = session.query(WorkflowModel).filter(WorkflowModel.id == workflow_id).first()
|
||
|
|
if study is not None:
|
||
|
|
prev_value = study.key
|
||
|
|
else:
|
||
|
|
prev_value = None
|
||
|
|
study = DataStoreModel(key=args[0],value=args[1],
|
||
|
|
study_id=study_id,
|
||
|
|
task_id=task.id,
|
||
|
|
user_id=None, # Make this available to any User
|
||
|
|
workflow_id= workflow_id,
|
||
|
|
spec_id=workflow.workflow_spec_id)
|
||
|
|
|
||
|
|
overwritten = self.overwritten(study.value,prev_value)
|
||
|
|
session.add(study)
|
||
|
|
return (study.value, prev_value, overwritten)
|
||
|
|
|
||
|
|
|
||
|
|
def get_prev_value(self,study_id,key):
|
||
|
|
study = session.query(DataStoreModel).filter_by(study_id=study_id,user_id=None,key=key).first()
|
||
|
|
return study
|
||
|
|
|
||
|
|
|
||
|
|
def check_args(self, args):
|
||
|
|
if len(args) != 2:
|
||
|
|
raise ApiError(code="missing_argument",
|
||
|
|
message="The study_data_set script takes two arguments, starting with the key and a " +\
|
||
|
|
"value for the key")
|