cr-connect-workflow/tests/test_lookup_service.py

import os

from tests.base_test import BaseTest

from crc.services.file_service import FileService
from crc.api.common import ApiError
from crc import session, app
from crc.models.file import FileDataModel, FileModel, LookupFileModel, LookupDataModel, CONTENT_TYPES
from crc.services.lookup_service import LookupService
from crc.services.workflow_processor import WorkflowProcessor


class TestLookupService(BaseTest):

    def test_lookup_returns_good_error_on_bad_field(self):
        spec = BaseTest.load_test_spec('enum_options_with_search')
        workflow = self.create_workflow('enum_options_with_search')
        file_model = session.query(FileModel).filter(FileModel.name == "customer_list.xls").first()
        file_data_model = session.query(FileDataModel).filter(FileDataModel.file_model == file_model).first()
        with self.assertRaises(ApiError):
            LookupService.lookup(workflow, "Task_Enum_Lookup", "not_the_right_field", "sam", limit=10)

    def test_lookup_table_is_not_created_more_than_once(self):
        spec = BaseTest.load_test_spec('enum_options_with_search')
        workflow = self.create_workflow('enum_options_with_search')
        LookupService.lookup(workflow, "Task_Enum_Lookup", "sponsor", "sam", limit=10)
        LookupService.lookup(workflow, "Task_Enum_Lookup", "sponsor", "something", limit=10)
        LookupService.lookup(workflow, "Task_Enum_Lookup", "sponsor", "blah", limit=10)
        lookup_records = session.query(LookupFileModel).all()
        self.assertIsNotNone(lookup_records)
        self.assertEqual(1, len(lookup_records))
        lookup_record = lookup_records[0]
        lookup_data = session.query(LookupDataModel).filter(LookupDataModel.lookup_file_model == lookup_record).all()
        self.assertEqual(28, len(lookup_data))

    def test_updates_to_file_cause_lookup_rebuild(self):
        spec = BaseTest.load_test_spec('enum_options_with_search')
        workflow = self.create_workflow('enum_options_with_search')
        file_model = session.query(FileModel).filter(FileModel.name == "sponsors.xls").first()
        LookupService.lookup(workflow, "Task_Enum_Lookup", "sponsor", "sam", limit=10)
        lookup_records = session.query(LookupFileModel).all()
        self.assertIsNotNone(lookup_records)
        self.assertEqual(1, len(lookup_records))
        lookup_record = lookup_records[0]
        lookup_data = session.query(LookupDataModel).filter(LookupDataModel.lookup_file_model == lookup_record).all()
        self.assertEqual(28, len(lookup_data))

        # Update the workflow specification file.
        file_path = os.path.join(app.root_path, '..', 'tests', 'data',
                                 'enum_options_with_search', 'sponsors_modified.xls')
        file = open(file_path, 'rb')
        FileService.update_file(file_model, file.read(), CONTENT_TYPES['xls'])
        file.close()

        # restart the workflow, so it can pick up the changes.

        processor = WorkflowProcessor(workflow)
        processor.reset(workflow)
        workflow = processor.workflow_model

        LookupService.lookup(workflow, "Task_Enum_Lookup", "sponsor", "sam", limit=10)
        lookup_records = session.query(LookupFileModel).all()
        lookup_record = lookup_records[0]
        lookup_data = session.query(LookupDataModel).filter(LookupDataModel.lookup_file_model == lookup_record).all()
        self.assertEqual(4, len(lookup_data))

    def test_lookup_based_on_id(self):
        spec = BaseTest.load_test_spec('enum_options_from_file')
        workflow = self.create_workflow('enum_options_from_file')
        processor = WorkflowProcessor(workflow)
        processor.do_engine_steps()
        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "", value="1000", limit=10)
        self.assertEqual(1, len(results), "It is possible to find an item based on the id, rather than as a search")
        self.assertIsNotNone(results[0].data)
        self.assertIsInstance(results[0].data, dict)


    def test_lookup_with_two_spreadsheets_with_the_same_field_name_in_different_forms(self):
        spec = BaseTest.load_test_spec('enum_options_competing_files')
        workflow = self.create_workflow('enum_options_competing_files')
        processor = WorkflowProcessor(workflow)

        processor.do_engine_steps()
        task = processor.get_ready_user_tasks()[0]
        task.data = {"type": "animal"}
        processor.complete_task(task)
        processor.do_engine_steps()
        task = processor.get_ready_user_tasks()[0]
        results = LookupService.lookup(workflow, task.task_spec.name, "selectedItem", "", value="pigs", limit=10)
        self.assertEqual(1, len(results), "It is possible to find an item based on the id, rather than as a search")
        self.assertIsNotNone(results[0].data)
        results = LookupService.lookup(workflow, task.task_spec.name, "selectedItem", "", value="apples", limit=10)
        self.assertEqual(0, len(results), "We shouldn't find our fruits mixed in with our animals.")


        processor.reset(workflow, clear_data=True)
        processor.do_engine_steps()
        task = processor.get_ready_user_tasks()[0]
        task.data = {"type": "fruit"}
        processor.complete_task(task)
        processor.do_engine_steps()
        task = processor.get_ready_user_tasks()[0]
        results = LookupService.lookup(workflow, task.task_spec.name, "selectedItem", "", value="apples", limit=10)
        self.assertEqual(1, len(results), "It is possible to find an item based on the id, rather than as a search")
        self.assertIsNotNone(results[0].data)
        results = LookupService.lookup(workflow, task.task_spec.name, "selectedItem", "", value="pigs", limit=10)
        self.assertEqual(0, len(results), "We shouldn't find our animals mixed in with our fruits.")


    def test_some_full_text_queries(self):
        spec = BaseTest.load_test_spec('enum_options_from_file')
        workflow = self.create_workflow('enum_options_from_file')
        processor = WorkflowProcessor(workflow)
        processor.do_engine_steps()

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "", limit=10)
        self.assertEqual(10, len(results), "Blank queries return everything, to the limit")

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "medicines", limit=10)
        self.assertEqual(1, len(results), "words in the middle of label are detected.")
        self.assertEqual("The Medicines Company", results[0].label)

        results = LookupService.lookup(workflow,"TaskEnumLookup", "AllTheNames", "UVA", limit=10)
        self.assertEqual(1, len(results), "Beginning of label is found.")
        self.assertEqual("UVA - INTERNAL - GM USE ONLY", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup","AllTheNames", "uva", limit=10)
        self.assertEqual(1, len(results), "case does not matter.")
        self.assertEqual("UVA - INTERNAL - GM USE ONLY", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "medici", limit=10)
        self.assertEqual(1, len(results), "partial words are picked up.")
        self.assertEqual("The Medicines Company", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "Genetics Savings", limit=10)
        self.assertEqual(1, len(results), "multiple terms are picked up..")
        self.assertEqual("Genetics Savings & Clone, Inc.", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "Genetics Sav", limit=10)
        self.assertEqual(1, len(results), "prefix queries still work with partial terms")
        self.assertEqual("Genetics Savings & Clone, Inc.", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "Gen Sav", limit=10)
        self.assertEqual(1, len(results), "prefix queries still work with ALL the partial terms")
        self.assertEqual("Genetics Savings & Clone, Inc.", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "Inc", limit=10)
        self.assertEqual(7, len(results), "short terms get multiple correct results.")
        self.assertEqual("Genetics Savings & Clone, Inc.", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "reaction design", limit=10)
        self.assertEqual(3, len(results), "all results come back for two terms.")
        self.assertEqual("Reaction Design", results[0].label, "Exact matches come first.")

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "1 Something", limit=10)
        self.assertEqual("1 Something", results[0].label, "Exact matches are preferred")

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "1 (!-Something", limit=10)
        self.assertEqual("1 Something", results[0].label, "special characters don't flake out")

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "1  Something", limit=10)
        self.assertEqual("1 Something", results[0].label, "double spaces should not be an issue.")

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "in", limit=10)
        self.assertEqual(10, len(results), "stop words are not removed.")
        self.assertEqual("Genetics Savings & Clone, Inc.", results[0].label)

        results = LookupService.lookup(workflow, "TaskEnumLookup", "AllTheNames", "other", limit=10)
        self.assertEqual("Other", results[0].label, "Can't find the word 'other', which is an english stop word")