cr-connect-workflow/tests/test_protocol_builder.py

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from tests.base_test import BaseTest
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from unittest.mock import patch
from crc import app
from crc.services.protocol_builder import ProtocolBuilderService
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class TestProtocolBuilder(BaseTest):
test_uid = "dhf8r"
test_study_id = 1
@patch('crc.services.protocol_builder.requests.get')
def test_get_studies(self, mock_get):
app.config['PB_ENABLED'] = True
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mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('user_studies.json')
response = ProtocolBuilderService.get_studies(self.test_uid)
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self.assertIsNotNone(response)
@patch('crc.services.protocol_builder.requests.get')
def test_get_investigators(self, mock_get):
app.config['PB_ENABLED'] = True
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mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('investigators.json')
response = ProtocolBuilderService.get_investigators(self.test_study_id)
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self.assertIsNotNone(response)
self.assertEqual(5, len(response))
self.assertEqual("DC", response[0]["INVESTIGATORTYPE"])
self.assertEqual("Department Contact", response[0]["INVESTIGATORTYPEFULL"])
self.assertEqual("asd3v", response[0]["NETBADGEID"])
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@patch('crc.services.protocol_builder.requests.get')
def test_get_required_docs(self, mock_get):
app.config['PB_ENABLED'] = True
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mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('required_docs.json')
response = ProtocolBuilderService.get_required_docs(self.test_study_id)
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self.assertIsNotNone(response)
self.assertEqual(5, len(response))
self.assertEqual(6, response[0]['AUXDOCID'])
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@patch('crc.services.protocol_builder.requests.get')
def test_get_details(self, mock_get):
app.config['PB_ENABLED'] = True
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mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('study_details.json')
response = ProtocolBuilderService.get_study_details(self.test_study_id)
self.assertIsNotNone(response)
self.assertEqual(65, len(response))
self.assertEqual('1234', response['IND_1'])
@patch('crc.services.protocol_builder.requests.get')
def test_get_study_sponsors(self, mock_get):
app.config['PB_ENABLED'] = True
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('sponsors.json')
response = ProtocolBuilderService.get_sponsors(self.test_study_id)
self.assertIsNotNone(response)
self.assertEqual(3, len(response))
self.assertEqual(2, response[0]["SS_STUDY"])
self.assertEqual(2453, response[0]["SPONSOR_ID"])
self.assertEqual("Abbott Ltd", response[0]["SP_NAME"])
@patch('crc.services.protocol_builder.requests.get')
def test_get_irb_info(self, mock_get):
app.config['PB_ENABLED'] = True
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('irb_info.json')
response = ProtocolBuilderService.get_irb_info(self.test_study_id)
self.assertIsNotNone(response)
self.assertEqual(3, len(response))
self.assertEqual('IRB Event 1', response[0]["IRBEVENT"])
self.assertEqual('IRB Event 2', response[1]["IRBEVENT"])
self.assertEqual('IRB Event 3', response[2]["IRBEVENT"])
@patch('crc.services.protocol_builder.requests.get')
def test_check_study(self, mock_get):
app.config['PB_ENABLED'] = True
mock_get.return_value.ok = True
mock_get.return_value.text = self.protocol_builder_response('check_study.json')
response = ProtocolBuilderService.check_study(self.test_study_id)
self.assertIsNotNone(response)
self.assertIn('DETAIL', response[0].keys())
self.assertIn('STATUS', response[0].keys())