sartography
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cr-connect-workflow
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
{
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Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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"pipfile-spec": 6,
"requires": {
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
"python_version": "3.7"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Lots and lots of random stuff as I organize code and get things to make sense.
2019-12-18 19:02:17 +00:00
"index": "pypi",
Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
"version": "==1.4.0"
Updates packages.
2020-01-22 21:50:54 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
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Adding file management. Files are stored in the database along with basic meta data.
2019-12-27 18:50:03 +00:00
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Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
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Adding file management. Files are stored in the database along with basic meta data.
2019-12-27 18:50:03 +00:00
"version": "==4.8.2"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
"billiard": {
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Updates study model to better match Protocol Builder. Deletes all migrations and starts over, since Alembic has problems migrating changes to existing column constraints.
2020-02-28 16:14:30 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
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Updates study model to better match Protocol Builder. Deletes all migrations and starts over, since Alembic has problems migrating changes to existing column constraints.
2020-02-28 16:14:30 +00:00
"version": "==3.6.3.0"
Updates packages.
2020-01-22 21:50:54 +00:00
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"certifi": {
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Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
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Provide a script for generating word documents from template files. Refractored file managment into a service to make it easier to programatically add files. Modified the workflow_processor to inject the study_id and workflow_id into the running workflow so that this meta-information is avialable at the task level.
2020-02-10 21:19:23 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"commonmark": {
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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"connexion": {
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
"extras": [
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"hashes": [
Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==2.6.0"
Lots and lots of random stuff as I organize code and get things to make sense.
2019-12-18 19:02:17 +00:00
},
"coverage": {
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Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
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Lots and lots of random stuff as I organize code and get things to make sense.
2019-12-18 19:02:17 +00:00
],
"index": "pypi",
Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
"version": "==5.0.3"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
},
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Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
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ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
],
Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
"version": "==0.16"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
Provide a script for generating word documents from template files. Refractored file managment into a service to make it easier to programatically add files. Modified the workflow_processor to inject the study_id and workflow_id into the running workflow so that this meta-information is avialable at the task level.
2020-02-10 21:19:23 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages.
2020-01-22 21:50:54 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
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Updates packages
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Updates packages
2020-01-31 16:32:46 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
"version": "==3.5.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
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"openpyxl": {
"hashes": [
Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
"sha256:547a9fc6aafcf44abe358b89ed4438d077e9d92e4f182c87e2dc294186dc4b64"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Adds type hinting to db and session to fix Pycharm autocomplete. Replaces db.session with session.
2020-01-14 16:45:12 +00:00
"version": "==3.0.3"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"packaging": {
"hashes": [
Updates packages
2020-01-31 16:32:46 +00:00
"sha256:170748228214b70b672c581a3dd610ee51f733018650740e98c7df862a583f73",
"sha256:e665345f9eef0c621aa0bf2f8d78cf6d21904eef16a93f020240b704a57f1334"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
],
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==20.1"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
},
Converting this over to using Postgres. See the new postgres directory for a docker container to spin this up. Tests and development databases are the same, will try and get this corrected at some point.
2020-02-04 19:25:17 +00:00
"psycopg2-binary": {
"hashes": [
"sha256:040234f8a4a8dfd692662a8308d78f63f31a97e1c42d2480e5e6810c48966a29",
"sha256:086f7e89ec85a6704db51f68f0dcae432eff9300809723a6e8782c41c2f48e03",
"sha256:18ca813fdb17bc1db73fe61b196b05dd1ca2165b884dd5ec5568877cabf9b039",
"sha256:19dc39616850342a2a6db70559af55b22955f86667b5f652f40c0e99253d9881",
"sha256:2166e770cb98f02ed5ee2b0b569d40db26788e0bf2ec3ae1a0d864ea6f1d8309",
"sha256:3a2522b1d9178575acee4adf8fd9f979f9c0449b00b4164bb63c3475ea6528ed",
"sha256:3aa773580f85a28ffdf6f862e59cb5a3cc7ef6885121f2de3fca8d6ada4dbf3b",
"sha256:3b5deaa3ee7180585a296af33e14c9b18c218d148e735c7accf78130765a47e3",
"sha256:407af6d7e46593415f216c7f56ba087a9a42bd6dc2ecb86028760aa45b802bd7",
"sha256:4c3c09fb674401f630626310bcaf6cd6285daf0d5e4c26d6e55ca26a2734e39b",
"sha256:4c6717962247445b4f9e21c962ea61d2e884fc17df5ddf5e35863b016f8a1f03",
"sha256:50446fae5681fc99f87e505d4e77c9407e683ab60c555ec302f9ac9bffa61103",
"sha256:5057669b6a66aa9ca118a2a860159f0ee3acf837eda937bdd2a64f3431361a2d",
"sha256:5dd90c5438b4f935c9d01fcbad3620253da89d19c1f5fca9158646407ed7df35",
"sha256:659c815b5b8e2a55193ede2795c1e2349b8011497310bb936da7d4745652823b",
"sha256:69b13fdf12878b10dc6003acc8d0abf3ad93e79813fd5f3812497c1c9fb9be49",
"sha256:7a1cb80e35e1ccea3e11a48afe65d38744a0e0bde88795cc56a4d05b6e4f9d70",
"sha256:7e6e3c52e6732c219c07bd97fff6c088f8df4dae3b79752ee3a817e6f32e177e",
"sha256:7f42a8490c4fe854325504ce7a6e4796b207960dabb2cbafe3c3959cb00d1d7e",
"sha256:84156313f258eafff716b2961644a4483a9be44a5d43551d554844d15d4d224e",
"sha256:8578d6b8192e4c805e85f187bc530d0f52ba86c39172e61cd51f68fddd648103",
"sha256:890167d5091279a27e2505ff0e1fb273f8c48c41d35c5b92adbf4af80e6b2ed6",
"sha256:98e10634792ac0e9e7a92a76b4991b44c2325d3e7798270a808407355e7bb0a1",
"sha256:9aadff9032e967865f9778485571e93908d27dab21d0fdfdec0ca779bb6f8ad9",
"sha256:9f24f383a298a0c0f9b3113b982e21751a8ecde6615494a3f1470eb4a9d70e9e",
"sha256:a73021b44813b5c84eda4a3af5826dd72356a900bac9bd9dd1f0f81ee1c22c2f",
"sha256:afd96845e12638d2c44d213d4810a08f4dc4a563f9a98204b7428e567014b1cd",
"sha256:b73ddf033d8cd4cc9dfed6324b1ad2a89ba52c410ef6877998422fcb9c23e3a8",
"sha256:b8f490f5fad1767a1331df1259763b3bad7d7af12a75b950c2843ba319b2415f",
"sha256:dbc5cd56fff1a6152ca59445178652756f4e509f672e49ccdf3d79c1043113a4",
"sha256:eac8a3499754790187bb00574ab980df13e754777d346f85e0ff6df929bcd964",
"sha256:eaed1c65f461a959284649e37b5051224f4db6ebdc84e40b5e65f2986f101a08"
],
"index": "pypi",
"version": "==2.8.4"
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"pycparser": {
"hashes": [
"sha256:a988718abfad80b6b157acce7bf130a30876d27603738ac39f140993246b25b3"
],
"version": "==2.19"
},
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"pygments": {
"hashes": [
"sha256:2a3fe295e54a20164a9df49c75fa58526d3be48e14aceba6d6b1e8ac0bfd6f1b",
"sha256:98c8aa5a9f778fcd1026a17361ddaf7330d1b7c62ae97c3bb0ae73e0b9b6b0fe"
],
"version": "==2.5.2"
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"pyjwt": {
"hashes": [
"sha256:5c6eca3c2940464d106b99ba83b00c6add741c9becaec087fb7ccdefea71350e",
"sha256:8d59a976fb773f3e6a39c85636357c4f0e242707394cadadd9814f5cbaa20e96"
],
"index": "pypi",
"version": "==1.7.1"
},
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"pyparsing": {
"hashes": [
"sha256:4c830582a84fb022400b85429791bc551f1f4871c33f23e44f353119e92f969f",
"sha256:c342dccb5250c08d45fd6f8b4a559613ca603b57498511740e65cd11a2e7dcec"
],
"version": "==2.4.6"
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"pyrsistent": {
"hashes": [
Allow submitting data and progressing to the next task in a workflow.
2020-01-14 16:02:44 +00:00
"sha256:cdc7b5e3ed77bed61270a47d35434a30617b9becdf2478af76ad2c6ade307280"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Allow submitting data and progressing to the next task in a workflow.
2020-01-14 16:02:44 +00:00
"version": "==0.15.7"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"python-dateutil": {
"hashes": [
"sha256:73ebfe9dbf22e832286dafa60473e4cd239f8592f699aa5adaf10050e6e1823c",
"sha256:75bb3f31ea686f1197762692a9ee6a7550b59fc6ca3a1f4b5d7e32fb98e2da2a"
],
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"index": "pypi",
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"version": "==2.8.1"
},
Provide a script for generating word documents from template files. Refractored file managment into a service to make it easier to programatically add files. Modified the workflow_processor to inject the study_id and workflow_id into the running workflow so that this meta-information is avialable at the task level.
2020-02-10 21:19:23 +00:00
"python-docx": {
"hashes": [
"sha256:ba9f2a7ca391b78ab385d796b38af3f21bab23c727fc8e0c5e630448d1a11fe3"
],
"version": "==0.8.7"
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"python-editor": {
"hashes": [
"sha256:1bf6e860a8ad52a14c3ee1252d5dc25b2030618ed80c022598f00176adc8367d",
"sha256:51fda6bcc5ddbbb7063b2af7509e43bd84bfc32a4ff71349ec7847713882327b",
"sha256:5f98b069316ea1c2ed3f67e7f5df6c0d8f10b689964a4a811ff64f0106819ec8"
],
"version": "==1.0.4"
},
"pytz": {
"hashes": [
"sha256:1c557d7d0e871de1f5ccd5833f60fb2550652da6be2693c1e02300743d21500d",
"sha256:b02c06db6cf09c12dd25137e563b31700d3b80fcc4ad23abb7a315f2789819be"
],
"version": "==2019.3"
},
"pyyaml": {
"hashes": [
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"sha256:059b2ee3194d718896c0ad077dd8c043e5e909d9180f387ce42012662a4946d6",
"sha256:1cf708e2ac57f3aabc87405f04b86354f66799c8e62c28c5fc5f88b5521b2dbf",
"sha256:24521fa2890642614558b492b473bee0ac1f8057a7263156b02e8b14c88ce6f5",
"sha256:4fee71aa5bc6ed9d5f116327c04273e25ae31a3020386916905767ec4fc5317e",
"sha256:70024e02197337533eef7b85b068212420f950319cc8c580261963aefc75f811",
"sha256:74782fbd4d4f87ff04159e986886931456a1894c61229be9eaf4de6f6e44b99e",
"sha256:940532b111b1952befd7db542c370887a8611660d2b9becff75d39355303d82d",
"sha256:cb1f2f5e426dc9f07a7681419fe39cee823bb74f723f36f70399123f439e9b20",
"sha256:dbbb2379c19ed6042e8f11f2a2c66d39cceb8aeace421bfc29d085d93eda3689",
"sha256:e3a057b7a64f1222b56e47bcff5e4b94c4f61faac04c7c4ecb1985e18caa3994",
"sha256:e9f45bd5b92c7974e59bcd2dcc8631a6b6cc380a904725fce7bc08872e691615"
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
],
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"version": "==5.3"
},
"recommonmark": {
"hashes": [
"sha256:29cd4faeb6c5268c633634f2d69aef9431e0f4d347f90659fd0aab20e541efeb",
"sha256:2ec4207a574289355d5b6ae4ae4abb29043346ca12cdd5f07d374dc5987d2852"
],
"index": "pypi",
"version": "==0.6.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"requests": {
"hashes": [
Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
"sha256:43999036bfa82904b6af1d99e4882b560e5e2c68e5c4b0aa03b655f3d7d73fee",
"sha256:b3f43d496c6daba4493e7c431722aeb7dbc6288f52a6e04e7b6023b0247817e6"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Fixing a rogue comma that made something a tuple and not a string, which drives me CRAZY.
2020-02-25 17:01:25 +00:00
"version": "==2.23.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"six": {
"hashes": [
Updates packages.
2020-01-22 21:50:54 +00:00
"sha256:236bdbdce46e6e6a3d61a337c0f8b763ca1e8717c03b369e87a7ec7ce1319c0a",
"sha256:8f3cd2e254d8f793e7f3d6d9df77b92252b52637291d0f0da013c76ea2724b6c"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Updates packages.
2020-01-22 21:50:54 +00:00
"version": "==1.14.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"snowballstemmer": {
"hashes": [
"sha256:209f257d7533fdb3cb73bdbd24f436239ca3b2fa67d56f6ff88e86be08cc5ef0",
"sha256:df3bac3df4c2c01363f3dd2cfa78cce2840a79b9f1c2d2de9ce8d31683992f52"
],
"version": "==2.0.0"
},
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
"soupsieve": {
"hashes": [
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"sha256:e914534802d7ffd233242b785229d5ba0766a7f487385e3f714446a07bf540ae",
"sha256:fcd71e08c0aee99aca1b73f45478549ee7e7fc006d51b37bec9e9def7dc22b69"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
],
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"version": "==2.0"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
},
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"sphinx": {
"hashes": [
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"sha256:776ff8333181138fae52df65be733127539623bb46cc692e7fa0fcfc80d7aa88",
"sha256:ca762da97c3b5107cbf0ab9e11d3ec7ab8d3c31377266fd613b962ed971df709"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
],
"index": "pypi",
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"version": "==2.4.3"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
},
"sphinxcontrib-applehelp": {
"hashes": [
"sha256:edaa0ab2b2bc74403149cb0209d6775c96de797dfd5b5e2a71981309efab3897",
"sha256:fb8dee85af95e5c30c91f10e7eb3c8967308518e0f7488a2828ef7bc191d0d5d"
],
"version": "==1.0.1"
},
"sphinxcontrib-devhelp": {
"hashes": [
"sha256:6c64b077937330a9128a4da74586e8c2130262f014689b4b89e2d08ee7294a34",
"sha256:9512ecb00a2b0821a146736b39f7aeb90759834b07e81e8cc23a9c70bacb9981"
],
"version": "==1.0.1"
},
"sphinxcontrib-htmlhelp": {
"hashes": [
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"sha256:3c0bc24a2c41e340ac37c85ced6dafc879ab485c095b1d65d2461ac2f7cca86f",
"sha256:e8f5bb7e31b2dbb25b9cc435c8ab7a79787ebf7f906155729338f3156d93659b"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
],
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"version": "==1.0.3"
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
},
"sphinxcontrib-jsmath": {
"hashes": [
"sha256:2ec2eaebfb78f3f2078e73666b1415417a116cc848b72e5172e596c871103178",
"sha256:a9925e4a4587247ed2191a22df5f6970656cb8ca2bd6284309578f2153e0c4b8"
],
"version": "==1.0.1"
},
"sphinxcontrib-qthelp": {
"hashes": [
"sha256:513049b93031beb1f57d4daea74068a4feb77aa5630f856fcff2e50de14e9a20",
"sha256:79465ce11ae5694ff165becda529a600c754f4bc459778778c7017374d4d406f"
],
"version": "==1.0.2"
},
"sphinxcontrib-serializinghtml": {
"hashes": [
"sha256:c0efb33f8052c04fd7a26c0a07f1678e8512e0faec19f4aa8f2473a8b81d5227",
"sha256:db6615af393650bf1151a6cd39120c29abaf93cc60db8c48eb2dddbfdc3a9768"
],
"version": "==1.1.3"
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"spiffworkflow": {
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
"editable": true,
"git": "https://github.com/sartography/SpiffWorkflow.git",
New set of "Tools" api endpoints, that provides a way to quickly render markdown or word documents by uploading json data and a template to populate. Improved Error messages / Error processing. You can now just throw an APIError anywhere, and it will be properly serialized and returned.
2020-02-29 22:22:38 +00:00
"ref": "d8dbbb4e0575e8346e3342f314b76a0bce140530"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"sqlalchemy": {
"hashes": [
Updates packages.
2020-01-22 21:50:54 +00:00
"sha256:64a7b71846db6423807e96820993fa12a03b89127d278290ca25c0b11ed7b4fb"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Updates packages.
2020-01-22 21:50:54 +00:00
"version": "==1.3.13"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
"swagger-ui-bundle": {
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"hashes": [
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
"sha256:49d2e12d60a6499e9d37ea37953b5d700f4e114edc7520fe918bae5eb693a20e",
"sha256:c5373b683487b1b914dccd23bcd9a3016afa2c2d1cda10f8713c0a9af0f91dd3",
"sha256:f776811855092c086dbb08216c8810a84accef8c76c796a135caa13645c5cc68"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
"index": "pypi",
"version": "==0.0.6"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"urllib3": {
"hashes": [
Updates packages.
2020-01-22 21:50:54 +00:00
"sha256:2f3db8b19923a873b3e5256dc9c2dedfa883e33d87c690d9c7913e1f40673cdc",
"sha256:87716c2d2a7121198ebcb7ce7cccf6ce5e9ba539041cfbaeecfb641dc0bf6acc"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Updates packages.
2020-01-22 21:50:54 +00:00
"version": "==1.25.8"
},
"vine": {
"hashes": [
"sha256:133ee6d7a9016f177ddeaf191c1f58421a1dcc6ee9a42c58b34bed40e1d2cd87",
"sha256:ea4947cc56d1fd6f2095c8d543ee25dad966f78692528e68b4fada11ba3f98af"
],
"version": "==1.3.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
"waitress": {
"hashes": [
Converting this over to using Postgres. See the new postgres directory for a docker container to spin this up. Tests and development databases are the same, will try and get this corrected at some point.
2020-02-04 19:25:17 +00:00
"sha256:045b3efc3d97c93362173ab1dfc159b52cfa22b46c3334ffc805dbdbf0e4309e",
"sha256:77ff3f3226931a1d7d8624c5371de07c8e90c7e5d80c5cc660d72659aaf23f38"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
],
Converting this over to using Postgres. See the new postgres directory for a docker container to spin this up. Tests and development databases are the same, will try and get this corrected at some point.
2020-02-04 19:25:17 +00:00
"version": "==1.4.3"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
},
"webob": {
"hashes": [
Updates packages.
2020-01-22 21:50:54 +00:00
"sha256:a3c89a8e9ba0aeb17382836cdb73c516d0ecf6630ec40ec28288f3ed459ce87b",
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Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
],
Updates packages.
2020-01-22 21:50:54 +00:00
"version": "==1.8.6"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
},
"webtest": {
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Updates packages
2020-01-31 16:32:46 +00:00
"sha256:71114cd778a7d7b237ec5c8a5c32084f447d869ae62e48bcd5b73af211133e74",
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Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
],
"index": "pypi",
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==2.0.34"
Setting up tests to work correctly when verifying endpoints.
2019-11-21 16:36:32 +00:00
},
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
"werkzeug": {
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Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Returning better cleaner information about workflow with the workflow endpoint. Removes the get_all_tasks and get_user_tasks endpoints as tasks are returned with the workflow. Workflow endpoint also includes the last task and next_task, which may or may not be user tasks. The task "type" returned is now the class name of the task_spec, rather than just the word "task".
2020-02-07 16:34:44 +00:00
"version": "==1.0.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
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Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"sha256:488e1988ab16ff3a9cd58c7656d0a58f8abe46ee58b98eecea78c022db28656b",
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Adds user_uid and investigator_ids fields to Study. Gets studies from protocol builder and adds them if they aren't already in the database
2020-02-26 23:06:51 +00:00
"version": "==1.2.8"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
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Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
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Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
"version": "==3.0.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
}
},
"develop": {
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
"attrs": {
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"sha256:08a96c641c3a74e44eb59afb61a24f2cb9f4d7188748e76ba4bb5edfa3cb7d1c",
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"version": "==19.3.0"
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Updates packages
2020-01-31 16:32:46 +00:00
"sha256:06f5b3a99029c7134207dd882428a66992a9de2bef7c2b699b5641f9886c3302",
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Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
"markers": "python_version < '3.8'",
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==1.5.0"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"more-itertools": {
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Updates packages
2020-01-31 16:32:46 +00:00
"sha256:5dd8bcf33e5f9513ffa06d5ad33d78f31e1931ac9a18f33d37e77a180d393a7c",
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Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==8.2.0"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"packaging": {
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Updates packages
2020-01-31 16:32:46 +00:00
"sha256:170748228214b70b672c581a3dd610ee51f733018650740e98c7df862a583f73",
"sha256:e665345f9eef0c621aa0bf2f8d78cf6d21904eef16a93f020240b704a57f1334"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==20.1"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"pluggy": {
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Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
"sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0",
"sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Creating a dependency on the SpiffWorkflow fork we created. and placing the command line script into this code base and demonstrating that our workflow processor works at least on that level. Removing all kinds of garbage that had piled up before to keep this thing clean.
2019-12-11 16:45:44 +00:00
"version": "==0.13.1"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"py": {
"hashes": [
Adds endpoints for creating and updating a Study.
2020-01-03 16:44:24 +00:00
"sha256:5e27081401262157467ad6e7f851b7aa402c5852dbcb3dae06768434de5752aa",
"sha256:c20fdd83a5dbc0af9efd622bee9a5564e278f6380fffcacc43ba6f43db2813b0"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Adds endpoints for creating and updating a Study.
2020-01-03 16:44:24 +00:00
"version": "==1.8.1"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"pyparsing": {
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Adding file management. Files are stored in the database along with basic meta data.
2019-12-27 18:50:03 +00:00
"sha256:4c830582a84fb022400b85429791bc551f1f4871c33f23e44f353119e92f969f",
"sha256:c342dccb5250c08d45fd6f8b4a559613ca603b57498511740e65cd11a2e7dcec"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Adding file management. Files are stored in the database along with basic meta data.
2019-12-27 18:50:03 +00:00
"version": "==2.4.6"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"pytest": {
"hashes": [
Updates packages
2020-01-31 16:32:46 +00:00
"sha256:0d5fe9189a148acc3c3eb2ac8e1ac0742cb7618c084f3d228baaec0c254b318d",
"sha256:ff615c761e25eb25df19edddc0b970302d2a9091fbce0e7213298d85fb61fef6"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
"index": "pypi",
Updates packages
2020-01-31 16:32:46 +00:00
"version": "==5.3.5"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
},
"six": {
"hashes": [
Updates packages.
2020-01-22 21:50:54 +00:00
"sha256:236bdbdce46e6e6a3d61a337c0f8b763ca1e8717c03b369e87a7ec7ce1319c0a",
"sha256:8f3cd2e254d8f793e7f3d6d9df77b92252b52637291d0f0da013c76ea2724b6c"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
],
Updates packages.
2020-01-22 21:50:54 +00:00
"version": "==1.14.0"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"wcwidth": {
"hashes": [
ReadTheDocs initial setup and configuration.
2020-01-07 18:40:31 +00:00
"sha256:8fd29383f539be45b20bd4df0dc29c20ba48654a41e661925e612311e9f3c603",
"sha256:f28b3e8a6483e5d49e7f8949ac1a78314e740333ae305b4ba5defd3e74fb37a8"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Adds endpoints for creating and updating a Study.
2020-01-03 16:44:24 +00:00
"version": "==0.1.8"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
},
"zipp": {
"hashes": [
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
"sha256:12248a63bbdf7548f89cb4c7cda4681e537031eda29c02ea29674bc6854460c2",
"sha256:7c0f8e91abc0dc07a5068f315c52cb30c66bfbc581e5b50704c8a2f6ebae794a"
Fixes broken pipenv files
2019-11-19 21:53:46 +00:00
],
Adding support to handle Single Sign On (Shibboleth) authentication using Flask SSO and an attribute map that has worked in the past with UVA's implementation. Aside from the new user endpoint, nothing requires authentication, but soon everything will expect it. I'm setting up a backdoor we can use for development and staging that will cause a round-robin affair that should make this relatively painless. Dropped "RestException" as we had two ways or raising errors, and that was silly.
2020-02-18 21:38:56 +00:00
"version": "==3.0.0"
Adds basic Flask, Connexion, and SpiffWorkflow structure
2019-11-19 20:57:46 +00:00
}
}
}