mirror of
https://github.com/logos-storage/logos-storage-nim.git
synced 2026-01-02 13:33:10 +00:00
threading support for tree building
This commit is contained in:
parent
b14307e341
commit
8aa51dfdd9
@ -43,6 +43,8 @@ type
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ByteTree* = MerkleTree[ByteHash, ByteTreeKey]
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ByteProof* = MerkleProof[ByteHash, ByteTreeKey]
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CodexTreeTask* = MerkleTask[ByteHash, ByteTreeKey]
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CodexTree* = ref object of ByteTree
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mcodec*: MultiCodec
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@ -162,8 +164,11 @@ func init*(
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self.layers = ?merkleTreeWorker(self, leaves, isBottomLayer = true)
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success self
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proc initCodexTreeAsync*(
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tp: Taskpool, mcodec: MultiCodec = Sha256HashCodec, leaves: seq[ByteHash]
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proc init*(
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_: type CodexTree,
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tp: Taskpool,
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mcodec: MultiCodec = Sha256HashCodec,
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leaves: seq[ByteHash],
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): Future[?!CodexTree] {.async: (raises: [CancelledError]).} =
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if leaves.len == 0:
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return failure "Empty leaves"
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@ -177,26 +182,23 @@ proc initCodexTreeAsync*(
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if mhash.size != leaves[0].len:
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return failure "Invalid hash length"
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without threadPtr =? ThreadSignalPtr.new():
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without signal =? ThreadSignalPtr.new():
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return failure("Unable to create thread signal")
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defer:
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threadPtr.close().expect("closing once works")
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signal.close().expect("closing once works")
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var tree = CodexTree(compress: compressor, zero: Zero, mcodec: mcodec)
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var task = MerkleTask[ByteHash, ByteTreeKey](
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tree: cast[ptr MerkleTree[ByteHash, ByteTreeKey]](addr tree),
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leaves: @leaves,
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signal: threadPtr,
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)
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var task =
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CodexTreeTask(tree: cast[ptr ByteTree](addr tree), leaves: @leaves, signal: signal)
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doAssert tp.numThreads > 1,
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"Must have at least one separate thread or signal will never be fired"
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tp.spawn asyncMerkleTreeWorker(addr task)
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tp.spawn merkleTreeWorker(addr task)
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let threadFut = threadPtr.wait()
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let threadFut = signal.wait()
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if err =? catch(await threadFut.join()).errorOption:
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?catch(await noCancel threadFut)
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@ -213,9 +215,7 @@ proc initCodexTreeAsync*(
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success tree
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proc init*(
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_: type CodexTree, tp: Taskpool, leaves: openArray[MultiHash]
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): Future[?!CodexTree] =
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func init*(_: type CodexTree, leaves: openArray[MultiHash]): ?!CodexTree =
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if leaves.len == 0:
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return failure "Empty leaves"
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@ -223,19 +223,19 @@ proc init*(
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mcodec = leaves[0].mcodec
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leaves = leaves.mapIt(it.digestBytes)
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return initCodexTreeAsync(tp, mcodec, leaves)
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CodexTree.init(mcodec, leaves)
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proc init*(
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_: type CodexTree, tp: Taskpool, leaves: seq[Cid]
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): Future[?!CodexTree] {.async.} =
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_: type CodexTree, tp: Taskpool, leaves: seq[MultiHash]
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): Future[?!CodexTree] {.async: (raises: [CancelledError]).} =
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if leaves.len == 0:
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return failure("Empty leaves")
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return failure "Empty leaves"
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let
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mcodec = (?leaves[0].mhash.mapFailure).mcodec
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leaves = leaves.mapIt((?it.mhash.mapFailure).digestBytes)
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mcodec = leaves[0].mcodec
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leaves = leaves.mapIt(it.digestBytes)
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?catch(await initCodexTreeAsync(tp, mcodec, leaves))
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await CodexTree.init(tp, mcodec, leaves)
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func init*(_: type CodexTree, leaves: openArray[Cid]): ?!CodexTree =
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if leaves.len == 0:
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@ -247,6 +247,18 @@ func init*(_: type CodexTree, leaves: openArray[Cid]): ?!CodexTree =
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CodexTree.init(mcodec, leaves)
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proc init*(
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_: type CodexTree, tp: Taskpool, leaves: seq[Cid]
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): Future[?!CodexTree] {.async: (raises: [CancelledError]).} =
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if leaves.len == 0:
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return failure("Empty leaves")
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let
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mcodec = (?leaves[0].mhash.mapFailure).mcodec
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leaves = leaves.mapIt((?it.mhash.mapFailure).digestBytes)
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await CodexTree.init(tp, mcodec, leaves)
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proc fromNodes*(
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_: type CodexTree,
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mcodec: MultiCodec = Sha256HashCodec,
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@ -161,7 +161,7 @@ func merkleTreeWorker*[H, K](
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success @[@xs] & ?self.merkleTreeWorker(ys, isBottomLayer = false)
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proc asyncMerkleTreeWorker*[H, K](task: ptr MerkleTask[H, K]) {.gcsafe.} =
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proc merkleTreeWorker*[H, K](task: ptr MerkleTask[H, K]) {.gcsafe.} =
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defer:
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discard task[].signal.fireSync()
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@ -9,9 +9,11 @@
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{.push raises: [].}
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import std/sequtils
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import std/[sequtils, atomics]
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import pkg/poseidon2
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import pkg/taskpools
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import pkg/chronos/threadsync
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import pkg/constantine/math/io/io_fields
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import pkg/constantine/platforms/abstractions
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import pkg/questionable/results
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@ -44,6 +46,8 @@ type
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Poseidon2Tree* = MerkleTree[Poseidon2Hash, PoseidonKeysEnum]
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Poseidon2Proof* = MerkleProof[Poseidon2Hash, PoseidonKeysEnum]
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Poseidon2TreeTask* = MerkleTask[Poseidon2Hash, PoseidonKeysEnum]
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proc `$`*(self: Poseidon2Tree): string =
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let root = if self.root.isOk: self.root.get.toHex else: "none"
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"Poseidon2Tree(" & " root: " & root & ", leavesCount: " & $self.leavesCount &
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@ -77,9 +81,58 @@ func init*(_: type Poseidon2Tree, leaves: openArray[Poseidon2Hash]): ?!Poseidon2
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self.layers = ?merkleTreeWorker(self, leaves, isBottomLayer = true)
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success self
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proc init*(
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_: type Poseidon2Tree, tp: Taskpool, leaves: seq[Poseidon2Hash]
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): Future[?!Poseidon2Tree] {.async: (raises: [CancelledError]).} =
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if leaves.len == 0:
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return failure "Empty leaves"
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let compressor = proc(
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x, y: Poseidon2Hash, key: PoseidonKeysEnum
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): ?!Poseidon2Hash {.noSideEffect.} =
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success compress(x, y, key.toKey)
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without signal =? ThreadSignalPtr.new():
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return failure("Unable to create thread signal")
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defer:
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signal.close().expect("closing once works")
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var tree = Poseidon2Tree(compress: compressor, zero: Poseidon2Zero)
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var task = Poseidon2TreeTask(
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tree: cast[ptr Poseidon2Tree](addr tree), leaves: @leaves, signal: signal
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)
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doAssert tp.numThreads > 1,
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"Must have at least one separate thread or signal will never be fired"
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tp.spawn merkleTreeWorker(addr task)
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let threadFut = signal.wait()
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if err =? catch(await threadFut.join()).errorOption:
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?catch(await noCancel threadFut)
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if err of CancelledError:
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raise (ref CancelledError) err
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if not task.success.load():
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return failure("merkle tree task failed")
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defer:
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task.layers = default(Isolated[seq[seq[Poseidon2Hash]]])
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tree.layers = task.layers.extract
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success tree
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func init*(_: type Poseidon2Tree, leaves: openArray[array[31, byte]]): ?!Poseidon2Tree =
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Poseidon2Tree.init(leaves.mapIt(Poseidon2Hash.fromBytes(it)))
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proc init*(
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_: type Poseidon2Tree, tp: Taskpool, leaves: seq[array[31, byte]]
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): Future[?!Poseidon2Tree] {.async: (raises: [CancelledError]).} =
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await Poseidon2Tree.init(tp, leaves.mapIt(Poseidon2Hash.fromBytes(it)))
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proc fromNodes*(
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_: type Poseidon2Tree, nodes: openArray[Poseidon2Hash], nleaves: int
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): ?!Poseidon2Tree =
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@ -1,51 +0,0 @@
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import std/sequtils
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import pkg/questionable/results
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import pkg/stew/byteutils
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import pkg/libp2p
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import pkg/taskpools
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import pkg/chronos
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import pkg/asynctest/chronos/unittest2
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export unittest2
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import pkg/codex/codextypes
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import pkg/codex/merkletree
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import pkg/codex/utils/digest
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import ./helpers
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# TODO: Generalize to other hashes
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const
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data = [
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"00000000000000000000000000000001".toBytes,
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"00000000000000000000000000000002".toBytes,
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"00000000000000000000000000000003".toBytes,
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"00000000000000000000000000000004".toBytes,
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"00000000000000000000000000000005".toBytes,
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"00000000000000000000000000000006".toBytes,
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"00000000000000000000000000000007".toBytes,
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"00000000000000000000000000000008".toBytes,
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"00000000000000000000000000000009".toBytes,
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"00000000000000000000000000000010".toBytes,
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]
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sha256 = Sha256HashCodec
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suite "Test CodexTree":
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var taskpool: Taskpool
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setup:
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taskpool = Taskpool.new()
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teardown:
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taskpool.shutdown()
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test "Should build tree from multihash leaves asyncronosly":
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var t = await CodexTree.init(taskpool, sha256, leaves = data)
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var tree = t.tryGet()
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check:
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tree.isOk
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tree.get().leaves == data
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tree.get().mcodec == sha256
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@ -1,6 +1,5 @@
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import std/sequtils
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import pkg/unittest2
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import pkg/questionable/results
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import pkg/stew/byteutils
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import pkg/libp2p
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@ -9,8 +8,11 @@ import pkg/codex/codextypes
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import pkg/codex/merkletree
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import pkg/codex/utils/digest
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import pkg/taskpools
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import ./helpers
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import ./generictreetests
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import ../../asynctest
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# TODO: Generalize to other hashes
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@ -43,9 +45,22 @@ suite "Test CodexTree":
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CodexTree.init(sha256, leaves = newSeq[ByteHash]()).isErr
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test "Should build tree from multihash leaves":
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var expectedLeaves = data.mapIt(MultiHash.digest($sha256, it).tryGet())
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var
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expectedLeaves = data.mapIt(MultiHash.digest($sha256, it).tryGet())
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tree = CodexTree.init(leaves = expectedLeaves)
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check:
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tree.isOk
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tree.get().leaves == expectedLeaves.mapIt(it.digestBytes)
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tree.get().mcodec == sha256
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var tree = CodexTree.init(leaves = expectedLeaves)
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test "Should build tree from multihash leaves asynchronously":
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var tp = Taskpool.new(numThreads = 2)
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defer:
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tp.shutdown()
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let expectedLeaves = data.mapIt(MultiHash.digest($sha256, it).tryGet())
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let tree = (await CodexTree.init(tp, leaves = expectedLeaves))
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check:
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tree.isOk
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tree.get().leaves == expectedLeaves.mapIt(it.digestBytes)
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@ -63,6 +78,22 @@ suite "Test CodexTree":
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tree.get().leaves == expectedLeaves.mapIt(it.mhash.tryGet.digestBytes)
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tree.get().mcodec == sha256
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test "Should build tree from cid leaves asynchronously":
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var tp = Taskpool.new(numThreads = 2)
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defer:
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tp.shutdown()
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let expectedLeaves = data.mapIt(
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Cid.init(CidVersion.CIDv1, BlockCodec, MultiHash.digest($sha256, it).tryGet).tryGet
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)
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let tree = (await CodexTree.init(tp, leaves = expectedLeaves))
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check:
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tree.isOk
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tree.get().leaves == expectedLeaves.mapIt(it.mhash.tryGet.digestBytes)
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tree.get().mcodec == sha256
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test "Should build from raw digestbytes (should not hash leaves)":
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let tree = CodexTree.init(sha256, leaves = data).tryGet
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@ -70,6 +101,18 @@ suite "Test CodexTree":
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tree.mcodec == sha256
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tree.leaves == data
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test "Should build from raw digestbytes (should not hash leaves) asynchronously":
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var tp = Taskpool.new(numThreads = 2)
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defer:
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tp.shutdown()
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let tree = (await CodexTree.init(tp, sha256, leaves = @data))
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check:
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tree.isOk
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tree.get().mcodec == sha256
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tree.get().leaves == data
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test "Should build from nodes":
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let
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tree = CodexTree.init(sha256, leaves = data).tryGet
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@ -1,6 +1,5 @@
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import std/sequtils
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import pkg/unittest2
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import pkg/poseidon2
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import pkg/poseidon2/io
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import pkg/questionable/results
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@ -9,9 +8,11 @@ import pkg/stew/byteutils
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import pkg/stew/arrayops
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import pkg/codex/merkletree
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import pkg/taskpools
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import ./generictreetests
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import ./helpers
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import ../../asynctest
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const data = [
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"0000000000000000000000000000001".toBytes,
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@ -36,13 +37,14 @@ suite "Test Poseidon2Tree":
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check:
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Poseidon2Tree.init(leaves = newSeq[Poseidon2Hash](0)).isErr
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test "Init tree from poseidon2 leaves":
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let tree = Poseidon2Tree.init(leaves = expectedLeaves).tryGet
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test "Build tree from poseidon2 leaves":
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var taskpool = Taskpool.new(numThreads = 2)
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let tree = (await Poseidon2Tree.init(taskpool, leaves = expectedLeaves)).tryGet()
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check:
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tree.leaves == expectedLeaves
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test "Init tree from byte leaves":
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test "Build tree from byte leaves":
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let tree = Poseidon2Tree.init(
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leaves = expectedLeaves.mapIt(array[31, byte].initCopyFrom(it.toBytes))
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).tryGet
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@ -50,7 +52,7 @@ suite "Test Poseidon2Tree":
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check:
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tree.leaves == expectedLeaves
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test "Should build from nodes":
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test "Build tree from nodes":
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let
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tree = Poseidon2Tree.init(leaves = expectedLeaves).tryGet
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fromNodes = Poseidon2Tree.fromNodes(
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@ -60,6 +62,30 @@ suite "Test Poseidon2Tree":
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check:
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tree == fromNodes
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test "Build poseidon2 tree from poseidon2 leaves asynchronously":
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var tp = Taskpool.new(numThreads = 2)
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defer:
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tp.shutdown()
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let tree = (await Poseidon2Tree.init(tp, leaves = expectedLeaves)).tryGet()
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check:
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tree.leaves == expectedLeaves
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test "Build poseidon2 tree from byte leaves asynchronously":
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var tp = Taskpool.new(numThreads = 2)
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defer:
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tp.shutdown()
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let tree = (
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await Poseidon2Tree.init(
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tp, leaves = expectedLeaves.mapIt(array[31, byte].initCopyFrom(it.toBytes))
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)
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).tryGet()
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check:
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tree.leaves == expectedLeaves
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let
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compressor = proc(
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x, y: Poseidon2Hash, key: PoseidonKeysEnum
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