nim-sds/src/bloom.nim

131 lines
4.4 KiB
Nim

from math import ceil, ln, pow, round
import hashes
import strutils
import results
import private/probabilities
type BloomFilter* = object
capacity*: int
errorRate*: float
kHashes*: int
mBits*: int
intArray*: seq[int]
{.push overflowChecks: off.} # Turn off overflow checks for hashing operations
proc hashN(item: string, n: int, maxValue: int): int =
## Get the nth hash using Nim's built-in hash function using
## the double hashing technique from Kirsch and Mitzenmacher, 2008:
## http://www.eecs.harvard.edu/~kirsch/pubs/bbbf/rsa.pdf
let
hashA = abs(hash(item)) mod maxValue # Use abs to handle negative hashes
hashB = abs(hash(item & " b")) mod maxValue # string concatenation
abs((hashA + n * hashB)) mod maxValue
# # Use bit rotation for second hash instead of string concatenation if speed if preferred over FP-rate
# # Rotate left by 21 bits (lower the rotation, higher the speed but higher the FP-rate too)
# hashB = abs(
# ((h shl 21) or (h shr (sizeof(int) * 8 - 21)))
# ) mod maxValue
# abs((hashA + n.int64 * hashB)) mod maxValue
{.pop.}
proc getMOverNBitsForK*(
k: int, targetError: float, probabilityTable = kErrors
): Result[int, string] =
## Returns the optimal number of m/n bits for a given k.
if k notin 0 .. 12:
return err("K must be <= 12 if forceNBitsPerElem is not also specified.")
for mOverN in 2 .. probabilityTable[k].high:
if probabilityTable[k][mOverN] < targetError:
return ok(mOverN)
err(
"Specified value of k and error rate not achievable using less than 4 bytes / element."
)
proc initializeBloomFilter*(
capacity: int, errorRate: float, k = 0, forceNBitsPerElem = 0
): Result[BloomFilter, string] =
## Initializes a Bloom filter with specified parameters.
##
## Parameters:
## - capacity: Expected number of elements to be inserted
## - errorRate: Desired false positive rate (e.g., 0.01 for 1%)
## - k: Optional number of hash functions. If 0, calculated optimally
## See http://pages.cs.wisc.edu/~cao/papers/summary-cache/node8.html for
## useful tables on k and m/n (n bits per element) combinations.
## - forceNBitsPerElem: Optional override for bits per element
var
kHashes: int
nBitsPerElem: int
if k < 1: # Calculate optimal k and use that
let bitsPerElem = ceil(-1.0 * (ln(errorRate) / (pow(ln(2.float), 2))))
kHashes = round(ln(2.float) * bitsPerElem).int
nBitsPerElem = round(bitsPerElem).int
else: # Use specified k if possible
if forceNBitsPerElem < 1: # Use lookup table
let mOverNRes = getMOverNBitsForK(k = k, targetError = errorRate)
if mOverNRes.isErr:
return err(mOverNRes.error)
nBitsPerElem = mOverNRes.value
else:
nBitsPerElem = forceNBitsPerElem
kHashes = k
let
mBits = capacity * nBitsPerElem
mInts = 1 + mBits div (sizeof(int) * 8)
ok(
BloomFilter(
capacity: capacity,
errorRate: errorRate,
kHashes: kHashes,
mBits: mBits,
intArray: newSeq[int](mInts),
)
)
proc `$`*(bf: BloomFilter): string =
## Prints the configuration of the Bloom filter.
"Bloom filter with $1 capacity, $2 error rate, $3 hash functions, and requiring $4 bits of memory." %
[
$bf.capacity,
formatFloat(bf.errorRate, format = ffScientific, precision = 1),
$bf.kHashes,
$(bf.mBits div bf.capacity),
]
proc computeHashes(bf: BloomFilter, item: string): seq[int] =
var hashes = newSeq[int](bf.kHashes)
for i in 0 ..< bf.kHashes:
hashes[i] = hashN(item, i, bf.mBits)
hashes
proc insert*(bf: var BloomFilter, item: string) =
## Insert an item (string) into the Bloom filter.
let hashSet = bf.computeHashes(item)
for h in hashSet:
let
intAddress = h div (sizeof(int) * 8)
bitOffset = h mod (sizeof(int) * 8)
bf.intArray[intAddress] = bf.intArray[intAddress] or (1 shl bitOffset)
proc lookup*(bf: BloomFilter, item: string): bool =
## Lookup an item (string) in the Bloom filter.
## If the item is present, ``lookup`` is guaranteed to return ``true``.
## If the item is not present, ``lookup`` will return ``false``
## with a probability 1 - ``bf.errorRate``.
let hashSet = bf.computeHashes(item)
for h in hashSet:
let
intAddress = h div (sizeof(int) * 8)
bitOffset = h mod (sizeof(int) * 8)
currentInt = bf.intArray[intAddress]
if currentInt != (currentInt or (1 shl bitOffset)):
return false
true