"""High-precision figures for the LOW mixing-delay band (the design regime). countable-vs-old.yaml samples delay at 4/8/16/32 with 5 replicates. That resolves the overload regime but leaves the design regime under-measured: every countable-vs-unrestricted gap at delay <= 8 sits inside the replicate noise there, so the only honest statement is "no difference detected" — with no bound on how large an undetected difference could be. fine-delay.yaml spends replicates instead of range (delay 1..5, 40 replicates) to turn that into a real bound. Consumes: tsi-sweep --config configs/fine-delay.yaml --label fine-countable tsi-sweep --config configs/fine-delay.yaml --old --label fine-old and renders (into --out): fine_accuracy_vs_delay equilibrium D/D_true vs delay 1..5, countable (solid) vs unrestricted (dashed) per U, replicate-SEM bars. fine_gap_vs_delay THE precision figure: the countable - unrestricted gap with 95% CIs, against the U=0 negative-control band. A CI straddling zero means no difference at this power; the band shows the floor. Usage: python scripts/plot_fine_delay.py --countable RUNDIR --old RUNDIR \ --out figures/fine-delay """ from __future__ import annotations import argparse from pathlib import Path import matplotlib.pyplot as plt import numpy as np import pandas as pd from tsi_sim.plotting import style from tsi_sim.plotting.figures_pernode import equilibrium, sem DELAY = "blend_delay_max" # Normal approximation: with 40 replicates per arm the t-quantile is within ~2% of 1.96, # and the replicate spread itself is the dominant uncertainty, so 1.96 is precise enough. Z95 = 1.96 def _load(run_dir: str | Path) -> pd.DataFrame: return pd.read_parquet(Path(run_dir) / "results.parquet") def _cells(df: pd.DataFrame) -> pd.DataFrame: """Per (delay, U): replicate mean, SEM and count of the equilibrium accuracy.""" return equilibrium(df).groupby([DELAY, "max_uncles"], as_index=False).agg( mean_ratio=("mean_ratio", "mean"), sem_ratio=("mean_ratio", sem), n_rep=("mean_ratio", "size"), mean_q=("mean_q", "mean"), mean_q_eff=("mean_q_eff", "mean")) def gaps(cnt: pd.DataFrame, old: pd.DataFrame) -> pd.DataFrame: """countable - unrestricted per cell, with the unpaired SE and 95% CI half-width.""" m = cnt.merge(old, on=[DELAY, "max_uncles"], suffixes=("_c", "_o")) m["gap"] = m.mean_ratio_c - m.mean_ratio_o m["se"] = np.hypot(m.sem_ratio_c, m.sem_ratio_o) m["ci95"] = Z95 * m.se m["t"] = np.where(m.se > 0, np.abs(m.gap) / m.se.replace(0, np.nan), np.inf) return m.sort_values(["max_uncles", DELAY]) def fig_accuracy(cnt: pd.DataFrame, old: pd.DataFrame) -> plt.Figure: fig, ax = plt.subplots(figsize=(6.4, 4.2)) for i, u in enumerate(sorted(cnt["max_uncles"].unique())): c = style.color_for(i) a = cnt[cnt.max_uncles == u].sort_values(DELAY) b = old[old.max_uncles == u].sort_values(DELAY) ctl = " (control)" if u == 0 else "" ax.errorbar(a[DELAY], a.mean_ratio, yerr=a.sem_ratio, fmt="-o", color=c, label=f"U={u} countable{ctl}", ms=4, capsize=2, lw=1.2) ax.errorbar(b[DELAY], b.mean_ratio, yerr=b.sem_ratio, fmt="--s", color=c, label=f"U={u} unrestricted{ctl}", ms=4, capsize=2, alpha=0.75, lw=1.2) ax.axhline(1.0, color="0.4", lw=0.8, ls=":") ax.set_xlabel("max per-relay mixing delay (slots)") ax.set_ylabel(r"equilibrium $\hat{D}/D_{true}$") ax.set_title("Design-regime accuracy: countable vs unrestricted referencing") ax.legend(ncol=2, fontsize="x-small") return fig def pooled_by_delay(g: pd.DataFrame) -> pd.DataFrame: """Inverse-variance pooled gap across the U >= 1 arms, per delay. Individual cells are underpowered against a sub-0.1 % effect even at 40 replicates, but the three uncle caps are independent measurements of the same underlying difference, so pooling them buys back a factor of ~sqrt(3) and is what actually resolves the trend. """ u = g[g.max_uncles > 0] rows = [] for d, s in u.groupby(DELAY): w = 1.0 / s.se.to_numpy() ** 2 p = float((s.gap.to_numpy() * w).sum() / w.sum()) e = float(np.sqrt(1.0 / w.sum())) rows.append({DELAY: d, "gap": p, "se": e, "ci95": Z95 * e, "t": abs(p) / e if e > 0 else np.inf}) return pd.DataFrame(rows).sort_values(DELAY) def fig_gap(g: pd.DataFrame) -> plt.Figure: """The countable − unrestricted gap with 95% CIs, zoomed to the U >= 1 scale. The U=0 negative control is NOT plotted as a band here: with no uncles the models are identical by construction, but the unrecovered regime is so noisy that its CI (±0.025) is ~17x the entire range of the U >= 1 gaps and would fill the axes. Its magnitude is annotated instead — the point being that the control's noise floor lives far outside anything the uncle arms show, so those arms are measuring signal, not spread. """ fig, ax = plt.subplots(figsize=(6.6, 4.2)) pooled = pooled_by_delay(g) for i, u in enumerate(sorted(g["max_uncles"].unique())): if u == 0: continue a = g[g.max_uncles == u].sort_values(DELAY) ax.errorbar(a[DELAY], a.gap, yerr=a.ci95, fmt="-o", color=style.color_for(i), label=f"U={u}", ms=4, capsize=3, lw=1.0, alpha=0.75) ax.errorbar(pooled[DELAY], pooled.gap, yerr=pooled.ci95, fmt="-D", color="0.15", label="pooled over U≥1", ms=5, capsize=4, lw=1.8, zorder=5) ax.axhline(0.0, color="0.3", lw=0.9, ls=":") ax.set_xlabel("max per-relay mixing delay (slots)") ax.set_ylabel(r"$\hat{D}/D$ gap: countable $-$ unrestricted") ax.set_title("The first-fork cost across the design band (95% CI)") ctl = g[g.max_uncles == 0] if len(ctl): band = float(ctl.ci95.max()) span = float(np.abs(np.r_[g[g.max_uncles > 0].gap + g[g.max_uncles > 0].ci95, g[g.max_uncles > 0].gap - g[g.max_uncles > 0].ci95]).max()) ax.set_ylim(-1.35 * span, 1.35 * span) ax.text(0.015, 0.03, f"U=0 negative control (true gap = 0): 95% CI ±{band:.4f}, " f"{band / span:.0f}× outside this range", transform=ax.transAxes, fontsize=6.5, alpha=0.75) ax.legend(fontsize="x-small", ncol=2) return fig def main() -> None: ap = argparse.ArgumentParser(description=__doc__.splitlines()[0]) ap.add_argument("--countable", required=True, help="run dir of fine-countable") ap.add_argument("--old", required=True, help="run dir of fine-old") ap.add_argument("--out", default="figures/fine-delay") args = ap.parse_args() style.apply_style() out = Path(args.out) out.mkdir(parents=True, exist_ok=True) cnt, old = _cells(_load(args.countable)), _cells(_load(args.old)) g = gaps(cnt, old) prov = "tsi-sim-pernode fine-delay.yaml (+--old)" written = [] written += style.save(fig_accuracy(cnt, old), out / "fine_accuracy_vs_delay", prov) written += style.save(fig_gap(g), out / "fine_gap_vs_delay", prov) print(f"{'cell':<16} {'countable':>17} {'unrestricted':>17} " f"{'gap':>9} {'95% CI':>9} {'t':>6} verdict") for _, r in g.iterrows(): verdict = ("CONTROL (true gap = 0)" if r.max_uncles == 0 else "resolved" if r.t >= 2 else "no difference resolved") print(f"U={int(r.max_uncles)} delay={r[DELAY]:>5g} " f"{r.mean_ratio_c:.4f}+-{r.sem_ratio_c:.4f} " f"{r.mean_ratio_o:.4f}+-{r.sem_ratio_o:.4f} " f"{r.gap:+.4f} +-{r.ci95:.4f} {r.t:6.2f} {verdict}") worst = g[g.max_uncles > 0] print(f"\nn_rep = {int(g.n_rep_c.min())}/{int(g.n_rep_o.min())} per arm") print(f"widest 95% CI half-width at U>=1: +-{worst.ci95.max():.4f} " f"({100 * worst.ci95.max():.2f} pp)") # Per-cell significance must be read against the number of cells tested: with 15 cells, # ~0.75 are expected to clear t=2 by chance alone, so quote the Bonferroni threshold. bonf = 2.935 if len(worst) == 15 else float("nan") print(f"per-cell: {int((worst.t >= 2).sum())}/{len(worst)} cells with t>=2 " f"(expected by chance {0.05 * len(worst):.2f}); max t = {worst.t.max():.2f} " f"vs Bonferroni threshold {bonf:.3f}") print("\npooled over U>=1 (the three caps measure the same difference):") pooled = pooled_by_delay(g) for _, r in pooled.iterrows(): mark = " <-- resolved" if r.t >= 2 else "" print(f" delay={r[DELAY]:>4g}: {r.gap:+.5f} +-{r.ci95:.5f} t={r.t:5.2f}{mark}") w = 1.0 / worst.se.to_numpy() ** 2 allp = float((worst.gap.to_numpy() * w).sum() / w.sum()) alle = float(np.sqrt(1.0 / w.sum())) print(f" whole band: {allp:+.5f} +-{Z95 * alle:.5f} t={abs(allp) / alle:.2f}") ctl = g[g.max_uncles == 0] if len(ctl): print(f"\nU=0 negative control (true gap = 0): |gap| up to {ctl.gap.abs().max():.4f}, " f"max t = {ctl.t.max():.2f}, 95% CI +-{ctl.ci95.max():.4f} " f"-> control {'PASSES' if ctl.t.max() < 2 else 'FAILS'}") print(f"wrote {len(written)} files -> {out}") if __name__ == "__main__": main()