nim-codex/codex/stores/maintenance.nim

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Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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## Nim-Codex
## Copyright (c) 2023 Status Research & Development GmbH
## Licensed under either of
## * Apache License, version 2.0, ([LICENSE-APACHE](LICENSE-APACHE))
## * MIT license ([LICENSE-MIT](LICENSE-MIT))
## at your option.
## This file may not be copied, modified, or distributed except according to
## those terms.
## Store maintenance module
## Looks for and removes expired blocks from blockstores.
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import std/sequtils
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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import pkg/chronos
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import pkg/chronicles
import pkg/libp2p/cid
import pkg/serde/json
import pkg/datastore
import pkg/datastore/typedds
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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import pkg/questionable
import pkg/questionable/results
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import ./blockstore
import ./keyutils
import ./queryiterhelper
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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import ../utils/timer
import ../utils/asynciter
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import ../utils/json
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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import ../clock
feat: create logging proxy (#663) * implement a logging proxy The logging proxy: - prevents the need to import chronicles (as well as export except toJson), - prevents the need to override `writeValue` or use or import nim-json-seralization elsewhere in the codebase, allowing for sole use of utils/json for de/serialization, - and handles json formatting correctly in chronicles json sinks * Rename logging -> logutils to avoid ambiguity with common names * clean up * add setProperty for JsonRecord, remove nim-json-serialization conflict * Allow specifying textlines and json format separately Not specifying a LogFormat will apply the formatting to both textlines and json sinks. Specifying a LogFormat will apply the formatting to only that sink. * remove unneeded usages of std/json We only need to import utils/json instead of std/json * move serialization from rest/json to utils/json so it can be shared * fix NoColors ambiguity Was causing unit tests to fail on Windows. * Remove nre usage to fix Windows error Windows was erroring with `could not load: pcre64.dll`. Instead of fixing that error, remove the pcre usage :) * Add logutils module doc * Shorten logutils.formatIt for `NBytes` Both json and textlines formatIt were not needed, and could be combined into one formatIt * remove debug integration test config debug output and logformat of json for integration test logs * Use ## module doc to support docgen * bump nim-poseidon2 to export fromBytes Before the changes in this branch, fromBytes was likely being resolved by nim-stew, or other dependency. With the changes in this branch, that dependency was removed and fromBytes could no longer be resolved. By exporting fromBytes from nim-poseidon, the correct resolution is now happening. * fixes to get compiling after rebasing master * Add support for Result types being logged using formatIt
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import ../logutils
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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import ../systemclock
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logScope:
topics = "codex maintenance"
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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const
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DefaultDefaultExpiry* = 24.hours
DefaultMaintenanceInterval* = 5.minutes
DefaultBatchSize* = 1000
# if no progress was observed for this amount of time
# we're going to retry deletion of the dataset
DefaultRetryDelay* = 15.minutes
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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type
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DatasetMaintainer* = ref object of RootObj
blockStore: BlockStore
metaDs: TypedDatastore
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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interval: Duration
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defaultExpiry: Duration
batchSize: int
retryDelay: Duration
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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timer: Timer
clock: Clock
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Checkpoint* {.serialize.} = object
timestamp*: SecondsSince1970
progress*: Natural
DatasetMetadata* {.serialize.} = object
expiry*: SecondsSince1970
leavesCount*: Natural
manifestsCids*: seq[Cid]
checkpoint*: Checkpoint
MissingKey* = object of CodexError
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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proc new*(
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T: type DatasetMaintainer,
blockStore: BlockStore,
metaDs: Datastore,
defaultExpiry = DefaultDefaultExpiry,
interval = DefaultMaintenanceInterval,
batchSize = DefaultBatchSize,
retryDelay = DefaultRetryDelay,
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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timer = Timer.new(),
clock: Clock = SystemClock.new()
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): DatasetMaintainer =
## Create new DatasetMaintainer instance
##
## Call `start` to begin looking for for expired blocks
##
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DatasetMaintainer(
blockStore: blockStore,
metaDs: TypedDatastore.init(metaDs),
defaultExpiry: defaultExpiry,
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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interval: interval,
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batchSize: batchSize,
retryDelay: retryDelay,
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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timer: timer,
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clock: clock)
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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proc encode(t: Checkpoint): seq[byte] = serializer.toJson(t).toBytes()
proc decode(T: type Checkpoint, bytes: seq[byte]): ?!T = T.fromJson(bytes)
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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proc encode(t: DatasetMetadata): seq[byte] = serializer.toJson(t).toBytes()
proc decode(T: type DatasetMetadata, bytes: seq[byte]): ?!T = T.fromJson(bytes)
proc trackExpiry*(
self: DatasetMaintainer,
treeCid: Cid,
leavesCount: Natural,
expiry: SecondsSince1970,
manifestsCids: seq[Cid] = @[]
): Future[?!void] {.async.} =
# Starts tracking expiry of a given dataset
#
trace "Tracking an expiry of a dataset", treeCid, leavesCount, expiry
without key =? createDatasetMetadataKey(treeCid), err:
return failure(err)
await modify[DatasetMetadata](self.metaDs, key,
proc (maybeCurrDatasetMd: ?DatasetMetadata): Future[?DatasetMetadata] {.async.} =
var md: DatasetMetadata
if currDatasetMd =? maybeCurrDatasetMd:
md.expiry = max(currDatasetMd.expiry, expiry)
if currDatasetMd.leavesCount != leavesCount:
raise newException(CatchableError, "DatasetMetadata for treeCid " & $treeCid & " is already stored with leavesCount " &
$currDatasetMd.leavesCount & ", cannot override it with leavesCount " & $leavesCount)
md.leavesCount = leavesCount
md.manifestsCids = (currDatasetMd.manifestsCids & manifestsCids).deduplicate
md.checkpoint = Checkpoint(progress: 0, timestamp: 0)
else:
md.expiry = expiry
md.leavesCount = leavesCount
md.manifestsCids = manifestsCids
md.checkpoint = Checkpoint(progress: 0, timestamp: 0)
md.some
)
proc trackExpiry*(
self: DatasetMaintainer,
treeCid: Cid,
leavesCount: Natural,
manifestsCids: seq[Cid] = @[]
): Future[?!void] {.async.} =
await self.trackExpiry(treeCid, leavesCount, self.clock.now + self.defaultExpiry.seconds, manifestsCids)
proc trackExpiry*(
self: DatasetMaintainer,
cid: Cid,
manifestsCids: seq[Cid] = @[]
): Future[?!void] {.async.} =
await self.trackExpiry(cid, 0, self.clock.now + self.defaultExpiry.seconds, manifestsCids)
proc ensureExpiry*(
self: DatasetMaintainer,
treeCid: Cid,
minExpiry: SecondsSince1970): Future[?!void] {.async.} =
## Sets the dataset expiry to a max of two values: current expiry and `minExpiry`,
## if a dataset for given `treeCid` is not currently tracked a CatchableError is thrown
##
trace "Updating a dataset expiry", treeCid, minExpiry
without key =? createDatasetMetadataKey(treeCid), err:
return failure(err)
await modify[DatasetMetadata](self.metaDs, key,
proc (maybeCurrDatasetMd: ?DatasetMetadata): Future[?DatasetMetadata] {.async.} =
if currDatasetMd =? maybeCurrDatasetMd:
let datasetMd = DatasetMetadata(
expiry: max(currDatasetMd.expiry, minExpiry),
leavesCount: currDatasetMd.leavesCount,
manifestsCids: currDatasetMd.manifestsCids,
checkpoint: currDatasetMd.checkpoint
)
return datasetMd.some
else:
raise newException(CatchableError, "DatasetMetadata for treeCid " & $treeCid & " not found")
)
proc recordCheckpoint*(self: DatasetMaintainer, treeCid: Cid, datasetMd: DatasetMetadata): Future[?!void] {.async.} =
# Saves progress or deletes dataset metadata if progress > leavesCount
#
without key =? createDatasetMetadataKey(treeCid), err:
return failure(err)
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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await self.metaDs.modify(key,
proc (maybeCurrDatasetMd: ?DatasetMetadata): Future[?DatasetMetadata] {.async.} =
if currDatasetMd =? maybeCurrDatasetMd:
if currDatasetMd.expiry != datasetMd.expiry or currDatasetMd.manifestsCids != datasetMd.manifestsCids:
raise newException(CatchableError, "Change in expiry detected, interrupting maintenance for dataset with treeCid " & $treeCid)
if currDatasetMd.checkpoint.progress > datasetMd.checkpoint.progress:
raise newException(CatchableError, "Progress should be increasing only, treeCid " & $treeCid)
if currDatasetMd.leavesCount <= datasetMd.checkpoint.progress:
DatasetMetadata.none
else:
datasetMd.some
else:
raise newException(CatchableError, "Metadata for dataset with treeCid " & $treeCid & " not found")
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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)
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proc deleteBatch(self: DatasetMaintainer, treeCid: Cid, datasetMd: DatasetMetadata): Future[?!void] {.async.} =
var datasetMd = datasetMd
datasetMd.checkpoint.timestamp = self.clock.now
if err =? (await self.recordCheckpoint(treeCid, datasetMd)).errorOption:
return failure(err)
logScope:
treeCid = treeCid
manifestsCids = datasetMd.manifestsCids
startingIndex = datasetMd.checkpoint.progress
trace "Deleting a batch of blocks", size = self.batchSize
var index = datasetMd.checkpoint.progress
while (index < datasetMd.checkpoint.progress + self.batchSize) and
(index < datasetMd.leavesCount):
if err =? (await self.blockStore.delBlock(treeCid, index)).errorOption:
error "Error deleting a block", msg = err.msg, index
index.inc
await sleepAsync(50.millis) # cooperative scheduling
if index >= datasetMd.leavesCount:
trace "All blocks deleted from a dataset", leavesCount = datasetMd.leavesCount
for manifestCid in datasetMd.manifestsCids:
if err =? (await self.blockStore.delBlock(manifestCid)).errorOption:
error "Error deleting manifest", cid = manifestCid
if err =? (await self.blockStore.delBlock(treeCid)).errorOption:
error "Error deleting block", cid = treeCid
if err =? (await self.recordCheckpoint(treeCid, datasetMd)).errorOption:
return failure(err)
return success()
else:
datasetMd.checkpoint.progress = index
return await self.deleteBatch(treeCid, datasetMd)
proc superviseDatasetDeletion(self: DatasetMaintainer, treeCid: Cid, datasetMd: DatasetMetadata): Future[void] {.async.} =
logScope:
treeCid = treeCid
manifestsCids = datasetMd.manifestsCids
expiry = datasetMd.expiry
leavesCount = datasetMd.leavesCount
try:
if datasetMd.checkpoint.progress == 0 and datasetMd.checkpoint.timestamp == 0:
info "Initiating deletion of a dataset"
else:
info "Retrying deletion of a dataset", progress = datasetMd.checkpoint.progress, timestamp = datasetMd.checkpoint.timestamp
if err =? (await self.deleteBatch(treeCid, datasetMd)).errorOption:
error "Error occurred during deletion of a dataset", msg = err.msg
else:
info "Dataset deletion complete"
except CatchableError as err:
error "Unexpected error during dataset deletion", msg = err.msg, treeCid = treeCid
proc listDatasetMetadata*(
self: DatasetMaintainer
): Future[?!AsyncIter[(Cid, DatasetMetadata)]] {.async.} =
without queryKey =? createDatasetMetadataQueryKey(), err:
return failure(err)
without queryIter =? await query[DatasetMetadata](self.metaDs, Query.init(queryKey)), err:
error "Unable to execute block expirations query", err = err.msg
return failure(err)
without asyncQueryIter =? await queryIter.toAsyncIter(), err:
error "Unable to convert QueryIter to AsyncIter", err = err.msg
return failure(err)
let
filteredIter = await asyncQueryIter.filterSuccess()
datasetMdIter = await mapFilter[KeyVal[DatasetMetadata], (Cid, DatasetMetadata)](filteredIter,
proc (kv: KeyVal[DatasetMetadata]): Future[?(Cid, DatasetMetadata)] {.async.} =
without cid =? Cid.init(kv.key.value).mapFailure, err:
error "Failed decoding cid", err = err.msg
return (Cid, DatasetMetadata).none
(cid, kv.value).some
)
success(datasetMdIter)
proc checkDatasets(self: DatasetMaintainer): Future[?!void] {.async.} =
without iter =? await self.listDatasetMetadata(), err:
return failure(err)
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
2023-03-08 15:04:54 +00:00
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for fut in iter:
let (treeCid, datasetMd) = await fut
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
2023-03-08 15:04:54 +00:00
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if (datasetMd.expiry < self.clock.now) and
(datasetMd.checkpoint.timestamp + self.retryDelay.seconds < self.clock.now):
asyncSpawn self.superviseDatasetDeletion(treeCid, datasetMd)
else:
trace "Item either not expired or expired but already in maintenance", treeCid, expiry = datasetMd.expiry, timestamp = datasetMd.checkpoint.timestamp
success()
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
2023-03-08 15:04:54 +00:00
2024-06-05 17:09:04 +00:00
proc start*(self: DatasetMaintainer) =
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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proc onTimer(): Future[void] {.async.} =
try:
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if err =? (await self.checkDatasets()).errorOption:
error "Error when checking datasets", msg = err.msg
except Exception as exc:
error "Unexpected error during maintenance", msg = exc.msg
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
2023-03-08 15:04:54 +00:00
2024-06-05 17:09:04 +00:00
if self.interval.seconds > 0:
self.timer.start(onTimer, self.interval)
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
2023-03-08 15:04:54 +00:00
2024-06-05 17:09:04 +00:00
proc stop*(self: DatasetMaintainer): Future[void] {.async.} =
Blockstore maintenance (#347) * setting up * Implements timer utility * applies async and cancellation to timer loop * Sets up mocktimer and mockblockstore to set up first maintenance module test * wip: first test that calls blockChecker * wip: adding user type to timer callback * Chronicles doesn't like type-arguments? Disables logging in timer module for now * Implementing block check test for blockMaintainer module * Sets up additional tests for blockmaintainer * Removes generic from timer module. Implements numberOfBlocks per interval in blockMaintainer. * Implements blockMaintainer * Sets up tests for blockChecker * Some comments by Mark * Cleanup repostore tests * Setting up the use of std/times for block TTL tracking * repostore adds expiration timestamp * Defaults the repostore clock to the system clock * Applies updates to repostore interface. * Implements retrieving of block expiration information from repostore * Sets up tests for maintenance module behavior * Implements block maintenance module * Wires maintenance module into codex. Sets up integration tests for block expiration * Sets up test for missing behavior: removing timestamp metadata on block delete * Implements removing of expiration metadata in repoStore * Fixes integration tests for block expiration * Adds block expiration tests to integration test run * Handled some comments by Dmitriy * Review comment by Dmitriy: Removes seq[cid] from runBlockCheck * Review comment by Dmitriy: Moves key formatting methods to keyutils. * Review comment by Dmitriy: Encodes durations using chronos * Fixes conversion of TTL type in conf. * Review comments by Dmitriy * Adds unit tests for keyUtils. * Adds test coverage for exception in maintenance module
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await self.timer.stop()