nim-codex/codex/streams/storestream.nim

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## Nim-Codex
## Copyright (c) 2023 Status Research & Development GmbH
## Licensed under either of
## * Apache License, version 2.0, ([LICENSE-APACHE](LICENSE-APACHE))
## * MIT license ([LICENSE-MIT](LICENSE-MIT))
## at your option.
## This file may not be copied, modified, or distributed except according to
## those terms.
import std/options
import pkg/upraises
push: {.upraises: [].}
import pkg/chronos
import pkg/stew/ptrops
import ../stores
import ../manifest
import ../blocktype
feat: create logging proxy (#663) * implement a logging proxy The logging proxy: - prevents the need to import chronicles (as well as export except toJson), - prevents the need to override `writeValue` or use or import nim-json-seralization elsewhere in the codebase, allowing for sole use of utils/json for de/serialization, - and handles json formatting correctly in chronicles json sinks * Rename logging -> logutils to avoid ambiguity with common names * clean up * add setProperty for JsonRecord, remove nim-json-serialization conflict * Allow specifying textlines and json format separately Not specifying a LogFormat will apply the formatting to both textlines and json sinks. Specifying a LogFormat will apply the formatting to only that sink. * remove unneeded usages of std/json We only need to import utils/json instead of std/json * move serialization from rest/json to utils/json so it can be shared * fix NoColors ambiguity Was causing unit tests to fail on Windows. * Remove nre usage to fix Windows error Windows was erroring with `could not load: pcre64.dll`. Instead of fixing that error, remove the pcre usage :) * Add logutils module doc * Shorten logutils.formatIt for `NBytes` Both json and textlines formatIt were not needed, and could be combined into one formatIt * remove debug integration test config debug output and logformat of json for integration test logs * Use ## module doc to support docgen * bump nim-poseidon2 to export fromBytes Before the changes in this branch, fromBytes was likely being resolved by nim-stew, or other dependency. With the changes in this branch, that dependency was removed and fromBytes could no longer be resolved. By exporting fromBytes from nim-poseidon, the correct resolution is now happening. * fixes to get compiling after rebasing master * Add support for Result types being logged using formatIt
2024-01-23 07:35:03 +00:00
import ../logutils
import ../utils
import ./seekablestream
export stores, blocktype, manifest, chronos
logScope:
topics = "codex storestream"
const
StoreStreamTrackerName* = "StoreStream"
type
Download files without padding (#218) The initial goal of this patch was to allow to download of a file via REST API in exactly the same size as it was uploaded, which required adding fields Chunker.offset and Manifest.originalBytes to keep that size. On top of that, we added more integrity checks to operations on Manifest, and reorganized TestNode.nim to test the actual interaction between node.store and node.retrieve operations. Note that the wire format of Manifest was changed, so we need to recreate all BlockStores. * Download without padding * Fixed chunker tests * Chunker: get rid of RabinChunker * Verify offset in the chunker tests * Use manifest.originalBytesPadded in StoreStream.size * StoreStream: replace emptyBlock with zeroMem * Manifest.bytes: compute how many bytes corresponding StoreStream(Manifest, pad) will return * Manifest: verify originalBytes and originalLen on new/encode/decode Also set originalBytes in each Manifest creation/update scenario * Manifest: comments, split code into sections * Reordered parameters to deal with int64 size in 32-bit builds * TestNode.nim: combine Store and Retrieve tests 1. Instead of copy-pasting code from node.nim, new test calls node.store() and node.retrieve() in order to check that they can correctly store and then retrieve data 2. New test compares only file contents, manifest contents considered an implementation detail 3. New test chunks at odd chunkSize=BlockSize/1.618 in order to ensure that data retrieved correctly even when buffer sizes mismatch * TestNode.nim: code refactoring * Manifest.add: one more test * Manifest.verify: return Result instead of raising Defect * Node.store: added blockSize parameter
2022-08-24 12:15:59 +00:00
# Make SeekableStream from a sequence of blocks stored in Manifest
# (only original file data - see StoreStream.size)
StoreStream* = ref object of SeekableStream
Download files without padding (#218) The initial goal of this patch was to allow to download of a file via REST API in exactly the same size as it was uploaded, which required adding fields Chunker.offset and Manifest.originalBytes to keep that size. On top of that, we added more integrity checks to operations on Manifest, and reorganized TestNode.nim to test the actual interaction between node.store and node.retrieve operations. Note that the wire format of Manifest was changed, so we need to recreate all BlockStores. * Download without padding * Fixed chunker tests * Chunker: get rid of RabinChunker * Verify offset in the chunker tests * Use manifest.originalBytesPadded in StoreStream.size * StoreStream: replace emptyBlock with zeroMem * Manifest.bytes: compute how many bytes corresponding StoreStream(Manifest, pad) will return * Manifest: verify originalBytes and originalLen on new/encode/decode Also set originalBytes in each Manifest creation/update scenario * Manifest: comments, split code into sections * Reordered parameters to deal with int64 size in 32-bit builds * TestNode.nim: combine Store and Retrieve tests 1. Instead of copy-pasting code from node.nim, new test calls node.store() and node.retrieve() in order to check that they can correctly store and then retrieve data 2. New test compares only file contents, manifest contents considered an implementation detail 3. New test chunks at odd chunkSize=BlockSize/1.618 in order to ensure that data retrieved correctly even when buffer sizes mismatch * TestNode.nim: code refactoring * Manifest.add: one more test * Manifest.verify: return Result instead of raising Defect * Node.store: added blockSize parameter
2022-08-24 12:15:59 +00:00
store*: BlockStore # Store where to lookup block contents
manifest*: Manifest # List of block CIDs
method initStream*(s: StoreStream) =
if s.objName.len == 0:
s.objName = StoreStreamTrackerName
procCall SeekableStream(s).initStream()
proc new*(
T: type StoreStream,
store: BlockStore,
manifest: Manifest,
pad = true
): StoreStream =
## Create a new StoreStream instance for a given store and manifest
feat: create logging proxy (#663) * implement a logging proxy The logging proxy: - prevents the need to import chronicles (as well as export except toJson), - prevents the need to override `writeValue` or use or import nim-json-seralization elsewhere in the codebase, allowing for sole use of utils/json for de/serialization, - and handles json formatting correctly in chronicles json sinks * Rename logging -> logutils to avoid ambiguity with common names * clean up * add setProperty for JsonRecord, remove nim-json-serialization conflict * Allow specifying textlines and json format separately Not specifying a LogFormat will apply the formatting to both textlines and json sinks. Specifying a LogFormat will apply the formatting to only that sink. * remove unneeded usages of std/json We only need to import utils/json instead of std/json * move serialization from rest/json to utils/json so it can be shared * fix NoColors ambiguity Was causing unit tests to fail on Windows. * Remove nre usage to fix Windows error Windows was erroring with `could not load: pcre64.dll`. Instead of fixing that error, remove the pcre usage :) * Add logutils module doc * Shorten logutils.formatIt for `NBytes` Both json and textlines formatIt were not needed, and could be combined into one formatIt * remove debug integration test config debug output and logformat of json for integration test logs * Use ## module doc to support docgen * bump nim-poseidon2 to export fromBytes Before the changes in this branch, fromBytes was likely being resolved by nim-stew, or other dependency. With the changes in this branch, that dependency was removed and fromBytes could no longer be resolved. By exporting fromBytes from nim-poseidon, the correct resolution is now happening. * fixes to get compiling after rebasing master * Add support for Result types being logged using formatIt
2024-01-23 07:35:03 +00:00
##
result = StoreStream(
store: store,
manifest: manifest,
Download files without padding (#218) The initial goal of this patch was to allow to download of a file via REST API in exactly the same size as it was uploaded, which required adding fields Chunker.offset and Manifest.originalBytes to keep that size. On top of that, we added more integrity checks to operations on Manifest, and reorganized TestNode.nim to test the actual interaction between node.store and node.retrieve operations. Note that the wire format of Manifest was changed, so we need to recreate all BlockStores. * Download without padding * Fixed chunker tests * Chunker: get rid of RabinChunker * Verify offset in the chunker tests * Use manifest.originalBytesPadded in StoreStream.size * StoreStream: replace emptyBlock with zeroMem * Manifest.bytes: compute how many bytes corresponding StoreStream(Manifest, pad) will return * Manifest: verify originalBytes and originalLen on new/encode/decode Also set originalBytes in each Manifest creation/update scenario * Manifest: comments, split code into sections * Reordered parameters to deal with int64 size in 32-bit builds * TestNode.nim: combine Store and Retrieve tests 1. Instead of copy-pasting code from node.nim, new test calls node.store() and node.retrieve() in order to check that they can correctly store and then retrieve data 2. New test compares only file contents, manifest contents considered an implementation detail 3. New test chunks at odd chunkSize=BlockSize/1.618 in order to ensure that data retrieved correctly even when buffer sizes mismatch * TestNode.nim: code refactoring * Manifest.add: one more test * Manifest.verify: return Result instead of raising Defect * Node.store: added blockSize parameter
2022-08-24 12:15:59 +00:00
offset: 0)
result.initStream()
method `size`*(self: StoreStream): int =
## The size of a StoreStream is the size of the original dataset, without
## padding or parity blocks.
let m = self.manifest
(if m.protected: m.originalDatasetSize else: m.datasetSize).int
proc `size=`*(self: StoreStream, size: int)
{.error: "Setting the size is forbidden".} =
discard
method atEof*(self: StoreStream): bool =
self.offset >= self.size
method readOnce*(
self: StoreStream,
pbytes: pointer,
nbytes: int
): Future[int] {.async.} =
## Read `nbytes` from current position in the StoreStream into output buffer pointed by `pbytes`.
## Return how many bytes were actually read before EOF was encountered.
## Raise exception if we are already at EOF.
feat: create logging proxy (#663) * implement a logging proxy The logging proxy: - prevents the need to import chronicles (as well as export except toJson), - prevents the need to override `writeValue` or use or import nim-json-seralization elsewhere in the codebase, allowing for sole use of utils/json for de/serialization, - and handles json formatting correctly in chronicles json sinks * Rename logging -> logutils to avoid ambiguity with common names * clean up * add setProperty for JsonRecord, remove nim-json-serialization conflict * Allow specifying textlines and json format separately Not specifying a LogFormat will apply the formatting to both textlines and json sinks. Specifying a LogFormat will apply the formatting to only that sink. * remove unneeded usages of std/json We only need to import utils/json instead of std/json * move serialization from rest/json to utils/json so it can be shared * fix NoColors ambiguity Was causing unit tests to fail on Windows. * Remove nre usage to fix Windows error Windows was erroring with `could not load: pcre64.dll`. Instead of fixing that error, remove the pcre usage :) * Add logutils module doc * Shorten logutils.formatIt for `NBytes` Both json and textlines formatIt were not needed, and could be combined into one formatIt * remove debug integration test config debug output and logformat of json for integration test logs * Use ## module doc to support docgen * bump nim-poseidon2 to export fromBytes Before the changes in this branch, fromBytes was likely being resolved by nim-stew, or other dependency. With the changes in this branch, that dependency was removed and fromBytes could no longer be resolved. By exporting fromBytes from nim-poseidon, the correct resolution is now happening. * fixes to get compiling after rebasing master * Add support for Result types being logged using formatIt
2024-01-23 07:35:03 +00:00
##
if self.atEof:
raise newLPStreamEOFError()
# The loop iterates over blocks in the StoreStream,
# reading them and copying their data into outbuf
var read = 0 # Bytes read so far, and thus write offset in the outbuf
while read < nbytes and not self.atEof:
# Compute from the current stream position `self.offset` the block num/offset to read
# Compute how many bytes to read from this block
let
blockNum = self.offset div self.manifest.blockSize.int
blockOffset = self.offset mod self.manifest.blockSize.int
readBytes = min([self.size - self.offset,
nbytes - read,
self.manifest.blockSize.int - blockOffset])
address = BlockAddress(leaf: true, treeCid: self.manifest.treeCid, index: blockNum)
# Read contents of block `blockNum`
without blk =? await self.store.getBlock(address), error:
raise newException(LPStreamIncompleteError, "Incomplete data: " & error.msg)
trace "Reading bytes from store stream", manifestCid = self.manifest.cid.get(), numBlocks = self.manifest.blocksCount, blockNum, blkCid = blk.cid, bytes = readBytes, blockOffset
# Copy `readBytes` bytes starting at `blockOffset` from the block into the outbuf
Download files without padding (#218) The initial goal of this patch was to allow to download of a file via REST API in exactly the same size as it was uploaded, which required adding fields Chunker.offset and Manifest.originalBytes to keep that size. On top of that, we added more integrity checks to operations on Manifest, and reorganized TestNode.nim to test the actual interaction between node.store and node.retrieve operations. Note that the wire format of Manifest was changed, so we need to recreate all BlockStores. * Download without padding * Fixed chunker tests * Chunker: get rid of RabinChunker * Verify offset in the chunker tests * Use manifest.originalBytesPadded in StoreStream.size * StoreStream: replace emptyBlock with zeroMem * Manifest.bytes: compute how many bytes corresponding StoreStream(Manifest, pad) will return * Manifest: verify originalBytes and originalLen on new/encode/decode Also set originalBytes in each Manifest creation/update scenario * Manifest: comments, split code into sections * Reordered parameters to deal with int64 size in 32-bit builds * TestNode.nim: combine Store and Retrieve tests 1. Instead of copy-pasting code from node.nim, new test calls node.store() and node.retrieve() in order to check that they can correctly store and then retrieve data 2. New test compares only file contents, manifest contents considered an implementation detail 3. New test chunks at odd chunkSize=BlockSize/1.618 in order to ensure that data retrieved correctly even when buffer sizes mismatch * TestNode.nim: code refactoring * Manifest.add: one more test * Manifest.verify: return Result instead of raising Defect * Node.store: added blockSize parameter
2022-08-24 12:15:59 +00:00
if blk.isEmpty:
zeroMem(pbytes.offset(read), readBytes)
else:
copyMem(pbytes.offset(read), blk.data[blockOffset].unsafeAddr, readBytes)
# Update current positions in the stream and outbuf
self.offset += readBytes
read += readBytes
return read
method closeImpl*(self: StoreStream) {.async.} =
Download files without padding (#218) The initial goal of this patch was to allow to download of a file via REST API in exactly the same size as it was uploaded, which required adding fields Chunker.offset and Manifest.originalBytes to keep that size. On top of that, we added more integrity checks to operations on Manifest, and reorganized TestNode.nim to test the actual interaction between node.store and node.retrieve operations. Note that the wire format of Manifest was changed, so we need to recreate all BlockStores. * Download without padding * Fixed chunker tests * Chunker: get rid of RabinChunker * Verify offset in the chunker tests * Use manifest.originalBytesPadded in StoreStream.size * StoreStream: replace emptyBlock with zeroMem * Manifest.bytes: compute how many bytes corresponding StoreStream(Manifest, pad) will return * Manifest: verify originalBytes and originalLen on new/encode/decode Also set originalBytes in each Manifest creation/update scenario * Manifest: comments, split code into sections * Reordered parameters to deal with int64 size in 32-bit builds * TestNode.nim: combine Store and Retrieve tests 1. Instead of copy-pasting code from node.nim, new test calls node.store() and node.retrieve() in order to check that they can correctly store and then retrieve data 2. New test compares only file contents, manifest contents considered an implementation detail 3. New test chunks at odd chunkSize=BlockSize/1.618 in order to ensure that data retrieved correctly even when buffer sizes mismatch * TestNode.nim: code refactoring * Manifest.add: one more test * Manifest.verify: return Result instead of raising Defect * Node.store: added blockSize parameter
2022-08-24 12:15:59 +00:00
trace "Closing StoreStream"
self.offset = self.size # set Eof
await procCall LPStream(self).closeImpl()